PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_28532-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 270aa MW: 28875 Da PI: 6.8003

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_28532-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	31.4	3.7e-10	70	121	2	51
--SS-EEEEEEE--TT-SS-E.EEEEE-ST.T---EEEEEE-SSSTTEEEEE CS WRKY 2 dDgynWrKYGqKevkgsefpr.sYYrCtsa.gCpvkkkversaedpkvveit 51 +D ++WrKYGqK++kgs++p s + +++ + p ++v+ +++d ++ +t TRIUR3_28532-P1 70 SDLWAWRKYGQKPIKGSPHPSgSGSKSSHNeKQPQNQNVKEERKDHRAAATT 121 699****************973556777776677777788877777776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	12.989	64	131	IPR003657	WRKY domain
SuperFamily	SSF118290	1.44E-6	67	90	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	3.3E-9	67	121	IPR003657	WRKY domain
SMART	SM00774	0.0022	69	134	IPR003657	WRKY domain
Pfam	PF03106	2.3E-5	71	91	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MTAGDMVKLG ITPGQAAGCA IDAAIGGMQM SSPRNNNSGI KRRKNQARKV VCIPAPTTAG 60 SRPTGEVVPS DLWAWRKYGQ KPIKGSPHPS GSGSKSSHNE KQPQNQNVKE ERKDHRAAAT 120 TTATTTTSTV TTTTSTSPVV VKEETLAGSS SEAQARDQRA MDTVAGVLHQ VDHRELMDHV 180 FSESYRPMIP GSGQHHEDFF ADFADLAELE SDPMSLIFSK EYMEARPSGG AGDHGGQEKA 240 VAKELDPFDM LDWSTTSSTA GSTFEQGKRG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020197882.1	1e-148	probable WRKY transcription factor 35
TrEMBL	M7Z0E9	0.0	M7Z0E9_TRIUA; Putative WRKY transcription factor 35
STRING	TRIUR3_28532-P1	0.0	(Triticum urartu)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	3e-22	WRKY DNA-binding protein 14