PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28409-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 387aa    MW: 42263.1 Da    PI: 9.9338
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28409-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.3e-31316374259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D ++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp+++++tYegeH+h+
  TRIUR3_28409-P1 316 ADDFSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERDPSDPSMLIVTYEGEHRHT 374
                      699***********************9888****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.0E-17264312IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.5E-32302374IPR003657WRKY domain
PROSITE profilePS5081130.32310376IPR003657WRKY domain
SuperFamilySSF1182908.37E-26313374IPR003657WRKY domain
SMARTSM007749.2E-37315375IPR003657WRKY domain
PfamPF031065.7E-26317373IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:1990841Molecular Functionpromoter-specific chromatin binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MSKVIVDQAA ERERLTKLKE EVVEAQTSHA KHVSKLRAQL GAREKTLVAA KRKAAAERDA  60
FLSLELRARQ GLLVEELEGA AAKVDSILEN ECRSLFSAAA MRVFSHLYLQ DPRFNFDAVV  120
GPIAPESHHK CQDAQRKAVA MMTMDLIGGY GRADEQVAIQ EAAAAGLRGM EHLILQLSRT  180
GTSESSPVGS SEAPEQQVDC REITDMTVSK FKKVISILNH RTGHARFRRG PVVAQSQGPA  240
VSEPAPPRPL ASSAVSTGAG GGQKRKCHDH AHSENVAGGK YGASGGRCHC SKRRKSRVRR  300
MTRVPAISSK AAEIPADDFS WRKYGQKPIK GSPYPRGYYK CSTVRGCPAR KHVERDPSDP  360
SMLIVTYEGE HRHTPADQEP LAPLPEL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-19302373171WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts, when in complex with WRKY71, specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1. {ECO:0000250|UniProtKB:Q0JEE2}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00275DAPTransfer from AT2G23320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells (By similarity) (PubMed:15618416). Accumulates in response to uniconazole, a gibberellic acid (GA) biosynthesis inhibitor (By similarity). Repressed by GA (PubMed:15618416). {ECO:0000250|UniProtKB:Q0JEE2, ECO:0000269|PubMed:15618416}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX2770540.0JX277054.1 Triticum aestivum WRKY51 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020168943.11e-149WRKY transcription factor WRKY51-like
SwissprotQ6IEN13e-73WRK51_ORYSI; WRKY transcription factor WRKY51
TrEMBLM8AF290.0M8AF29_TRIUA; Putative WRKY transcription factor 15
STRINGTRIUR3_28409-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.17e-51WRKY DNA-binding protein 15