PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_28055-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 77aa MW: 8584.95 Da PI: 11.1495 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33 | 1.2e-10 | 33 | 54 | 2 | 23 |
--SS-EEEEEEE--TT-SS-EE CS WRKY 2 dDgynWrKYGqKevkgsefprs 23 D ++WrKYGqK++kgs++pr+ TRIUR3_28055-P1 33 ADPWAWRKYGQKPIKGSPYPRG 54 699*****************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.8E-10 | 20 | 54 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.886 | 27 | 71 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.53E-8 | 30 | 54 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.6E-4 | 32 | 70 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-6 | 34 | 54 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence Send to blast |
MAQRQRRGHE QPKKEKKVVK KVVKRVAADG TSADPWAWRK YGQKPIKGSP YPRGILVEET 60 FVVTPWVTAP GGAAGWS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | DQ863129 | 8e-59 | DQ863129.1 Hordeum vulgare subsp. vulgare WRKY transcription factor 44 (WRKY44) mRNA, partial cds. | |||
GenBank | EU665436 | 8e-59 | EU665436.1 Triticum aestivum WRKY7 transcription factor mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025798400.1 | 3e-14 | probable WRKY transcription factor 27 | ||||
TrEMBL | M8AGB4 | 2e-47 | M8AGB4_TRIUA; WRKY transcription factor 22 | ||||
STRING | TRIUR3_28055-P1 | 3e-48 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP40773 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 5e-11 | WRKY family protein |