PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_26595-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 265aa    MW: 28059.4 Da    PI: 9.733
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_26595-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY24.45.8e-081181562459
                      EEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  24 YYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      + +C+++   gC+++++v+ s+++p+  +i Y g+H+++
  TRIUR3_26595-P1 118 WRKCSHKpdqGCQATRQVQESESNPSEYIISYYGQHTCK 156
                      569***9999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182901.96E-10105158IPR003657WRKY domain
SMARTSM007745.4E-9112157IPR003657WRKY domain
PROSITE profilePS5081110.097116158IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.9E-8120158IPR003657WRKY domain
PfamPF031063.8E-7120156IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MASCGGAGDD GGRSPPAVVY DDLVEVREHA ATLQTMLQGS PRVLDMDARE LVKGMMAKLS  60
SAMSVFGSTS GGVEASSGRK KRSATASGPH RRSTSRRRSK SPFINMVTAR TLNDGKTWRK  120
CSHKPDQGCQ ATRQVQESES NPSEYIISYY GQHTCKDPST FRSLFIQGAA DAAPPADCSN  180
LISFTSINGA AASTSTSAFA HCVVKEAVDL HPMLSSRFSN YSSSPPVQEG VSSGSPPPPP  240
PAPGRRAAAR GAVILRVDQN HLPHK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8274001e-146KR827400.1 Triticum aestivum WRKY49 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181741.11e-142probable WRKY transcription factor 34
TrEMBLM8A9770.0M8A977_TRIUA; Putative WRKY transcription factor 70
STRINGTRIUR3_26595-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125272837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.13e-08WRKY DNA-binding protein 54