PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24639-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 374aa    MW: 40196.8 Da    PI: 4.4585
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24639-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.73.5e-21135199359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT.....EEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk.....vveitYegeHnhe 59 
                      Dgy+WrKYGqK+++ +++pr+YYrCt +   gCp+k+ v+r+++d++       +++Y +eH ++
  TRIUR3_24639-P1 135 DGYQWRKYGQKQIEAAKHPRNYYRCTNStnqGCPAKRTVQRNDDDGSddgrpKYTVVYISEHSCK 199
                      9************************9888889**********99986444446889999999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-23120200IPR003657WRKY domain
SuperFamilySSF1182901.03E-20127200IPR003657WRKY domain
SMARTSM007744.6E-28133200IPR003657WRKY domain
PROSITE profilePS5081119.141135179IPR003657WRKY domain
PfamPF031062.0E-22135199IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MAIRSRGCAP GGEHAWAAAD GGMQLQRRER ELVAQLHELL YPSTSPSRSG ASSCSGLAAD  60
LCWEHGSSQV KATAASCAGG KRRGGRKRVR EDERHEEGQG HRGGAATATK ATTRCRRKKQ  120
GATTTTLVTT VPDFDGYQWR KYGQKQIEAA KHPRNYYRCT NSTNQGCPAK RTVQRNDDDG  180
SDDGRPKYTV VYISEHSCKA TESAAVPVIL ETTVRTDTAA APDVAVVPGS GGGANVPPRE  240
RDDYSRLFAI EDDCWGWNAS PPAPAAAAAL LQKMDFDGPI RSPAETADAV PDLEEESADA  300
VPYLEEESAD TVPDLEEEEE SADAVAELEE QESTEAATDL EERESADAVA DLEEEPADAV  360
SVALQRQCNP FSVE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-151351991069OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696620.0EU669662.1 Triticum aestivum WRKY32 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196414.11e-147WRKY transcription factor 22-like
TrEMBLM7ZPH10.0M7ZPH1_TRIUA; WRKY transcription factor 55
STRINGTRIUR3_24639-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.22e-14WRKY DNA-binding protein 67