PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24341-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 290aa    MW: 31565.1 Da    PI: 4.4971
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24341-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.6e-112202601055
                      HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      r+RR+riN+++ +L++l+P+      +K++ +++Le+Av+Y+k Lq
  TRIUR3_24341-P1 220 RKRRERINERLKTLQTLVPNG-----TKVDMSTMLEEAVQYVKFLQ 260
                      9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.637210259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-15212276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-13215273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-12216265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.31E-13219264No hitNo description
PfamPF000107.4E-9220260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009555Biological Processpollen development
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MEAGGLISEA GWTMFDFPPQ GEESDIMAQL LGTFPSHGED AQQDLPWYQA SHPSFYDTDL  60
NTSACSDSND GSFAVPSECM GYYLGDSSET LGISSCTAPQ DLNLVQEQGA IEYLNMIPTI  120
SHDLFGNGES SCEGLNSVSA TNKRKHSVEE EIEGQARGRK CARKAAPKRA KNAKQTEASC  180
CTSDNDSNAS QESADAGVTP KGKARAGRGA ATDPQSLYAR KRRERINERL KTLQTLVPNG  240
TKVDMSTMLE EAVQYVKFLQ LQIKVLSSDE MWMYAPIAYN GMNIGLDLNM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020192439.10.0transcription factor SPATULA-like
TrEMBLM8AW260.0M8AW26_TRIUA; Transcription factor bHLH84
STRINGTRIUR3_24341-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43103270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-45bHLH family protein