PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22360-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 591aa    MW: 64024.9 Da    PI: 6.11
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22360-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like61.41.7e-19189240153
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                      kpr  W ++LH++Fveav+q+ G+++A+P++il +m+v+ +++e v SHLQ Y
  TRIUR3_22360-P1 189 KPRTAWRNDLHDKFVEAVSQI-GIKRAVPSKILAAMNVDNVSRESVGSHLQVY 240
                      79*******************.*****************************99 PP
2Response_reg554.6e-1951111107
                      EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS
     Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealka 92 
                      vl +d +p+ +++l+++l+  +y + + ++d+  a ++l+e +  +Dl++ D+ +++mdG++ll+ i  e  +lp+iv++a + +e +++ +  
  TRIUR3_22360-P1   5 VLAIDNDPVSLKVLEVLLRMRNY-RPTIVRDAMMARQMLREGRdnFDLVVSDVYLSDMDGFKLLRLIDLEM-DLPVIVLSADERPEAMKKGIAH 96 
                      7899****************99*.999999999999999998889**********************8765.9********************* PP

                      TESEEEESS--HHHH CS
     Response_reg  93 GakdflsKpfdpeel 107
                      Ga ++l+Kp++ ++l
  TRIUR3_22360-P1  97 GACEYLVKPVQTKHL 111
                      *********988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.42E-272126IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.8E-302147No hitNo description
SMARTSM004481.9E-213115IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011035.3884119IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.9E-165111IPR001789Signal transduction response regulator, receiver domain
CDDcd001567.89E-226111No hitNo description
PROSITE profilePS5129410.003186245IPR017930Myb domain
SuperFamilySSF466891.52E-11187243IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.2E-18188242IPR009057Homeodomain-like
TIGRFAMsTIGR015573.8E-19189242IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    Send to blast
SGLRVLAIDN DPVSLKVLEV LLRMRNYRPT IVRDAMMARQ MLREGRDNFD LVVSDVYLSD  60
MDGFKLLRLI DLEMDLPVIV LSADERPEAM KKGIAHGACE YLVKPVQTKH LDIMWRHVMA  120
RRTPQPWRLS SSIRNAAAEK AQPTGGPGGG EQDGAKSTKR GWTKSHEHDE DGHDANKENL  180
SPNPSTGKKP RTAWRNDLHD KFVEAVSQIG IKRAVPSKIL AAMNVDNVSR ESVGSHLQVY  240
FLLLVLPTRM DHPSAFGARG AGVHGGSMLS RPWLSWLLPG LRQQPSSSSA YANRTNGTGA  300
WDAFGSSHSR GESSYMGMLR GNLLRANRGF QSSGSSFADG NRHNGGTSLP VNQFSVRPSR  360
QGFQPPVQRS PYGDAGNRLG NSWQAPMKYP DLSRDYWNIP NINQLTGLAA SPAGQIAGQT  420
PMSLDKLKNQ IAAFINSTKS LARSGEEMAL FDVDVTINNS TSSVQVLNGD FAIDGNTNSV  480
EMLNGDLSID DNTSWVEMLN GYLVMDGGTS LVEMPNGNFA LGSASSIGAA MLDLQMGISA  540
VPTRMLNDGG AGGVLPAQAQ DAADQEAVDG QLNIDSDDFL EALVDSFSMD D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A5e-15188244460ARR10-B
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLT1MWI30.0T1MWI3_TRIUA; Uncharacterized protein
STRINGTRIUR3_22360-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4973022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.12e-54response regulator 10