PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_22237-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GeBP | ||||||||
Protein Properties | Length: 233aa MW: 25649 Da PI: 4.751 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 53.5 | 6.8e-17 | 32 | 119 | 4 | 97 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 +lw++ Dei+lL G i+f+a+ g p d++++ye +++s+s+++++ + K++rLK Kf + s++h++ + ls +W TRIUR3_22237-P1 32 AKLWTDADEIALLNGAISFRARYGIAPRLpDVEGLYESLRDSLSSHINQAKVYYKLKRLKSKFCNTALP-------PTSTPHERRVRALSADLW 118 689**********************98877*********************************988766.......778899999999999999 PP DUF573 97 g 97 g TRIUR3_22237-P1 119 G 119 8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.7E-16 | 33 | 119 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MAAMDMAFEA TSGTRPSASE QSTCVVVLVS MAKLWTDADE IALLNGAISF RARYGIAPRL 60 PDVEGLYESL RDSLSSHINQ AKVYYKLKRL KSKFCNTALP PTSTPHERRV RALSADLWGT 120 EVAPSAEDLP EAEEPEEEDA DEEYTGADVP VAVSVRLPLV SELLGEYWRR NGRAMSGVSL 180 EKGLGLLGAE EGNVAETRWR RQLDAEMRTQ LRRHDLAKEV FGLLSDTIKG LGP |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK374142 | 0.0 | AK374142.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3055K08. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020180064.1 | 1e-142 | probable transcription factor At1g66420 | ||||
TrEMBL | M7ZBI9 | 1e-168 | M7ZBI9_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_22237-P1 | 1e-169 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2682 | 27 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01370.1 | 2e-10 | DNA-binding storekeeper protein-related transcriptional regulator |