PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT2G01370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | GeBP | ||||||||
Protein Properties | Length: 252aa MW: 29436.6 Da PI: 9.675 | ||||||||
Description | DNA-binding storekeeper protein-related transcriptional regulator | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 127.8 | 4.7e-40 | 79 | 172 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +fqr+ws++DeivlLqG++df++++gksp+dd+++f+++vk+ isf+++++q+++KirrLK+Kf kk+++ +e+s+ ++hd+k+f+lsk iW+ AT2G01370.1 79 YFQRIWSDDDEIVLLQGMVDFENDKGKSPYDDMTGFIDTVKNFISFQANQHQFTTKIRRLKDKFLKKWNN--GVDENSLVNAHDRKCFQLSKVIWE 172 8*********************************************************************..999********************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.2E-29 | 80 | 172 | IPR007592 | Protein of unknown function DUF573 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
MKGITKKLLV SRSLKRLTAK KNRRKIHRET NKRLKPEEDP SMVKRRQDSD SDSLEKEVSV 60 VVTKTSDDEM VSTDTKKNYF QRIWSDDDEI VLLQGMVDFE NDKGKSPYDD MTGFIDTVKN 120 FISFQANQHQ FTTKIRRLKD KFLKKWNNGV DENSLVNAHD RKCFQLSKVI WEPTTKVEEV 180 GDWFVNSYLV GSIARLGVSE DVMKQSWSMV PIETKKEVEE KFKLLKDEES ENLRLKTSFL 240 QKVNSMIIEA TN |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
Genevisible | 260600_at | 2e-80 | ||||
Expression Atlas | AT2G01370 | - | ||||
AtGenExpress | AT2G01370 | - |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT2G01370.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT2G01370 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC006200 | 0.0 | AC006200.3 Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete sequence. | |||
GenBank | AY649247 | 0.0 | AY649247.1 Arabidopsis thaliana hypothetical protein (At2g01370) gene, complete cds. | |||
GenBank | CP002685 | 0.0 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_178246.1 | 0.0 | DNA-binding storekeeper protein-related transcriptional regulator | ||||
Swissprot | Q9ZU30 | 0.0 | STKLF_ARATH; Probable transcription factor At2g01370 | ||||
TrEMBL | A0A178VT09 | 1e-180 | A0A178VT09_ARATH; Uncharacterized protein | ||||
STRING | AT2G01370.1 | 0.0 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM313 | 28 | 181 | Representative plant | OGRP4222 | 5 | 23 |
Link Out ? help Back to Top | |
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Phytozome | AT2G01370.1 |
Entrez Gene | 814665 |
iHOP | AT2G01370 |
wikigenes | AT2G01370 |
Publications ? help Back to Top | |||
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