PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22206-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 720aa    MW: 78637.3 Da    PI: 8.6494
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22206-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.6e-31277334260
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                      dDgynWrKYGqK+vkgse+prsYY+Ct+++C+vkk +er+  d+ ++e++Y+g+Hnh+k
  TRIUR3_22206-P1 277 DDGYNWRKYGQKHVKGSENPRSYYKCTHPNCEVKKLLERAV-DGLITEVVYKGRHNHPK 334
                      8****************************************.***************85 PP
2WRKY1079.4e-34450508159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k+ver+++dpk v++tYeg+Hnhe
  TRIUR3_22206-P1 450 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCPVRKHVERASHDPKSVITTYEGKHNHE 508
                      59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-27269335IPR003657WRKY domain
PROSITE profilePS5081123.525271335IPR003657WRKY domain
SuperFamilySSF1182902.88E-24275335IPR003657WRKY domain
SMARTSM007747.1E-35276334IPR003657WRKY domain
PfamPF031065.7E-24277333IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.9E-38435510IPR003657WRKY domain
SuperFamilySSF1182901.57E-29442510IPR003657WRKY domain
PROSITE profilePS5081138.871445510IPR003657WRKY domain
SMARTSM007741.4E-39450509IPR003657WRKY domain
PfamPF031062.6E-26451508IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 720 aa     Download sequence    Send to blast
MADSPNPSSG DLPSPAGSSP DKPYPADRRV AALAGAGARY KAMSPARLPI SREPCLTIPA  60
GFSPSALLDS PVLLTNFKVT AASLYCTSRL SPAVTTCYRG ICGLYGVRVM LRKIFIKVAF  120
ISEGEVEPSP TTGSLSMAAI MHKSAHPDIL PSPRDKSIRA HEDGGSRDFE FKPHLNSSSQ  180
SVAPAMSDLK KHEHSMQNQS MNPSSSSSNM VNENRPPCSR ESSLTVNVSA PNQPVGMVGL  240
TDSMPAEVGT SEPQQMNSSD NAMQEPQSEN VADKSADDGY NWRKYGQKHV KGSENPRSYY  300
KCTHPNCEVK KLLERAVDGL ITEVVYKGRH NHPKPQPNRR LAGGAVPSNQ GEERYDGAAA  360
ADDKSSNALS NLANAVNSPG MVEPVPVSVS DDDIDAGGGR SYPGDDGTEE EDLESKRRKM  420
ESAGIDAALM GKPNREPRVV VQTVSEVDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTSTG  480
CPVRKHVERA SHDPKSVITT YEGKHNHEVP AARNATHEMS APPMKNVVHQ INSNMPSSIG  540
GMMRACEVRN FSNQYSQAAE TDNVSLDLGV GISPNHSDAT NQMQSTGPDQ MQYQMQPMAS  600
MYSNMRHPSM AMPTVQGNSA GRMYGSREDK ARFLIVYRLQ VSSSRRQVYF VLLNYKFQPY  660
SKKGMDNQKC IKKHGWSKPP ESYVKLNIVA ALSLQEEIGA TGVLIRDDRG HFVLRRVTVE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-36277511878Probable WRKY transcription factor 4
2lex_A2e-36277511878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in starch synthesis (PubMed:12953112). Acts as a transcriptional activator in sugar signaling (PubMed:16167901). Interacts specifically with the SURE and W-box elements, but not with the SP8a element (PubMed:12953112). {ECO:0000269|PubMed:12953112, ECO:0000269|PubMed:16167901}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by sugar. {ECO:0000269|PubMed:12953112}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6654290.0EU665429.1 Triticum aestivum WRKY17 transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020176501.10.0WRKY transcription factor SUSIBA2
SwissprotQ6VWJ60.0WRK46_HORVU; WRKY transcription factor SUSIBA2
TrEMBLM7YDB30.0M7YDB3_TRIUA; Putative WRKY transcription factor 20
STRINGTRIUR3_22206-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67403851
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-106WRKY family protein