PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_18000-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 428aa    MW: 46100.3 Da    PI: 6.2327
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_18000-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.62.8e-2878136155
          G2-like   1 kprlrWtpeLHerFveaveqLGGse....kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      ++rlrWt eLH rF+eav+qLGG++     AtPk il++m+v+gLt++hvkSHLQkYRl
  TRIUR3_18000-P1  78 RQRLRWTDELHGRFLEAVAQLGGPDivlsGATPKGILRTMGVQGLTIYHVKSHLQKYRL 136
                      58*********************9844446****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-2777137IPR009057Homeodomain-like
SuperFamilySSF466895.73E-1677137IPR009057Homeodomain-like
TIGRFAMsTIGR015571.0E-2179137IPR006447Myb domain, plants
PfamPF002497.4E-880135IPR001005SANT/Myb domain
PfamPF143793.1E-9242268IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MDNSESVLNK NKKHGPTSTY GWTAFLARGC QMYEPKPFSS TGSAHSNPVS HDQQIGPTAN  60
NAASNIGGNG SNNSFATRQR LRWTDELHGR FLEAVAQLGG PDIVLSGATP KGILRTMGVQ  120
GLTIYHVKSH LQKYRLAKHI PDPTASGDKP EKKDLGNLLA GMESSPGMET SEVLKLQVEV  180
QKRLCEQLEG SPVHVAPTCS GFGEGVEIVH LTNGYEGKGK IALDFFYSNR NYITNCFSKT  240
YLQVQRQLQL RIEAQGKYLQ KIMEEQQRLS GVLCESGKPN ALALAEEELH HDFSKTEPST  300
PVLTSEPSFR DKAVTASGDL EGTDELLKVL SSHDDCLSLD HELSTPDSSC VAGYLLNSPR  360
DSKRACISNS LGHGNSEFTL PHIIPESSSG SDLQLRSSVF SSGTGRSGSS AALDASEDGF  420
TNGSGSDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-1878139158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-1878139158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-1878139158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-1878139158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP3304850.0KP330485.1 Triticum aestivum MYB transcription factor SM154 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020148390.10.0myb family transcription factor PHL7-like
RefseqXP_020148391.10.0myb family transcription factor PHL7-like
TrEMBLM7Z7E50.0M7Z7E5_TRIUA; Myb family transcription factor APL
STRINGTRIUR3_18000-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.16e-62G2-like family protein