PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_12624-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 177aa MW: 19637.8 Da PI: 6.9478 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27 | 1.2e-08 | 4 | 30 | 1 | 27 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk 27 lppG+rF Pt+eelv +yL++k++g++ TRIUR3_12624-P1 4 LPPGYRFYPTEEELVRFYLRHKLDGSR 30 79*********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.2E-8 | 3 | 30 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.1E-7 | 5 | 58 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
MAALPPGYRF YPTEEELVRF YLRHKLDGSR RAGIERGRRR RLFPGPVAAP RHVYMALEED 60 GADADAAAPA SNPVFQVRSE FSLCRLYTSS GNMRQFDRRP CTAVAGGSPP SSSAALASPN 120 EDVEVGRGQK RKRHAANDNT SSSDAYRHVQ QQQGKQEGAD EELADDMTDW AELLAWI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK359954 | 4e-44 | AK359954.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F05. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020158910.1 | 3e-65 | LOW QUALITY PROTEIN: NAC domain-containing protein 90-like | ||||
TrEMBL | M7ZE57 | 1e-127 | M7ZE57_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_12624-P1 | 1e-128 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP29144 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 6e-07 | NAC-domain protein 101 |