PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_12624-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 177aa    MW: 19637.8 Da    PI: 6.9478
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_12624-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM271.2e-08430127
              NAM  1 lppGfrFhPtdeelvveyLkkkvegkk 27
                     lppG+rF Pt+eelv +yL++k++g++
  TRIUR3_12624-P1  4 LPPGYRFYPTEEELVRFYLRHKLDGSR 30
                     79*********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.2E-8330IPR003441NAC domain
PfamPF023657.1E-7558IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MAALPPGYRF YPTEEELVRF YLRHKLDGSR RAGIERGRRR RLFPGPVAAP RHVYMALEED  60
GADADAAAPA SNPVFQVRSE FSLCRLYTSS GNMRQFDRRP CTAVAGGSPP SSSAALASPN  120
EDVEVGRGQK RKRHAANDNT SSSDAYRHVQ QQQGKQEGAD EELADDMTDW AELLAWI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3599544e-44AK359954.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158910.13e-65LOW QUALITY PROTEIN: NAC domain-containing protein 90-like
TrEMBLM7ZE571e-127M7ZE57_TRIUA; Uncharacterized protein
STRINGTRIUR3_12624-P11e-128(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2914433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.16e-07NAC-domain protein 101