PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_11866-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 528aa    MW: 60655.5 Da    PI: 10.0644
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_11866-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.41.6e-08328368346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +WT+eE  ++ + v++ G++ Wkt ++++g  +++ ++k+ w+ 
  TRIUR3_11866-P1 328 KWTQEEYHKIRQFVEKNGTD-WKTLSEELG--KSEIHVKDTWRR 368
                      8*******************.********8..9*******9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007171.3252323IPR001005SANT/Myb domain
PROSITE profilePS500904.054255308IPR017877Myb-like domain
PROSITE profilePS512949.798323374IPR017930Myb domain
SMARTSM007170.092325372IPR001005SANT/Myb domain
SuperFamilySSF466897.53E-9327387IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-8328380IPR009057Homeodomain-like
PfamPF139218.5E-10329387No hitNo description
PROSITE profilePS500907.886371439IPR017877Myb-like domain
SMARTSM007170.0031375441IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-7381440IPR009057Homeodomain-like
SuperFamilySSF466892.45E-6419496IPR009057Homeodomain-like
PROSITE profilePS500907.619441494IPR017877Myb-like domain
SMARTSM007172.3445496IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MKKDKKKGKE KKEEKEAGLG RQKQTFDTNT GKEQAEKSGL TAVNSCSERG DRADAEKVKK  60
YRKKKEKKKD KAAETTGQMQ AFDTTVENLG SEVYAERIKV KGRQSSSKSK KRKRKRQDGE  120
LAANISGADQ IVAMAREDNK RKKENSVVLK ESSQIDNTKK GTSKIGNGSD KVSSDLSQYA  180
FAGEEANADG KGDKKKKKRK EGIEGGKREK EKAARSKNKG RRVTFADSVV VFSIEGRDDE  240
EGGSSGGSEL VHGQRFTLEE EATLMEAMRD YAEMKQLGEE GLEMIRRCRK YPELMGCWSD  300
IGKSLPHRPY EAIYKRARIL LTRSDERKWT QEEYHKIRQF VEKNGTDWKT LSEELGKSEI  360
HVKDTWRRIK PKNLKKGRWT QDEHQNLFDL VNLDLRLKAH QEKNPGHRKL RDNISWEAIS  420
DKLTSRNHKN CCLKWYVTLA SPLVKQGVWA DIDDYRLVEA LQKVDAVCIE DVDWESLLGH  480
RSGEVCRQRW NQMVRGIGSH RQKAFIEQVE VLSKRYCPEM IDYRESEN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16166RKKKEK
26169RKKKEKKKD
3109114KKRKRK
4193199KKKKKRK
5194199KKKKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010227387.10.0RNA polymerase I termination factor
TrEMBLM7ZJW20.0M7ZJW2_TRIUA; Cyclin-D-binding Myb-like transcription factor 1
STRINGTRIUR3_11866-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54052635
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-102MYB_related family protein