PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_10994-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 309aa    MW: 32901.2 Da    PI: 7.0211
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_10994-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.61.1e-32167225159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK vk+s fprsYYrCt a+C vkk vers++dp++v++tYeg+H h+
  TRIUR3_10994-P1 167 LDDGYRWRKYGQKAVKNSSFPRSYYRCTAAQCGVKKLVERSQQDPSTVVTTYEGRHAHP 225
                      59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-32154227IPR003657WRKY domain
SuperFamilySSF1182907.72E-28161227IPR003657WRKY domain
PROSITE profilePS5081130.251162227IPR003657WRKY domain
SMARTSM007745.2E-37167226IPR003657WRKY domain
PfamPF031061.1E-25168225IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MSGSAAAGGE DHGAGQLYGN HRHAADGGDV LGNNVFFQSH SACAGGDDGG VIPSTYSSIT  60
DYLQGLLDPA ELARHLDAPP YFPAPGDVIG EAATPVTPNS STSGEATGAE SHGCKRGSPS  120
PEEGDEDGSA DHGSCRSEKK KMKEGKREKK PRGSRVAFAT KSAVDHLDDG YRWRKYGQKA  180
VKNSSFPRSY YRCTAAQCGV KKLVERSQQD PSTVVTTYEG RHAHPSPIAT HRGSRMLMAT  240
GVDTVYSLDV LQHQHHGFFP AGTDVYGRMY ALPSTDASVV AHRSSEYGGM QVHAGVLPDA  300
VMSYEHVHR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-251602271077Probable WRKY transcription factor 4
2lex_A3e-251602271077Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020180591.11e-180probable WRKY transcription factor 28
TrEMBLM7YVL60.0M7YVL6_TRIUA; Putative WRKY transcription factor 23
STRINGTRIUR3_10994-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62337173
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.12e-38WRKY DNA-binding protein 23