PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_10349-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 255aa    MW: 28271.6 Da    PI: 5.1585
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_10349-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.6e-121792191055
                      HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +rRR+riN+++ eL+ l+P+      +K++ +++Le+Av+Y+k Lq
  TRIUR3_10349-P1 179 KRRRERINEKLRELQNLIPNG-----TKVDISTTLEEAVQYVKFLQ 219
                      9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.06E-13169228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.856169218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-13170229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-12175224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.16E-12178223No hitNo description
PfamPF000102.1E-9179219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MEAKCAAIWS SVDGRSEESE MIAHLQSMFW SNSDAAVNLC SPNTSDNSCV TASTVHSNLF  60
LPLDMESHAT TPMVNTGMDL CFDHRHQTVT GHKRTSHMDE QIKRTSKKSR TVPSVSDAPC  120
LSLADNETNG DTVNQSSSSC CSSEEDLIDA SEESFVPNQG DNSRGCKRPS KNLQSLCAKR  180
RRERINEKLR ELQNLIPNGT KVDISTTLEE AVQYVKFLQL QIKVVLSSDE TWMYAPLAYN  240
GMDISLSLRI TTAQE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHE9968111e-177HE996811.1 Triticum aestivum cv. Arina SNP, chromosome 3B, clone Taes_arina_ctg_69457.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184287.11e-172transcription factor bHLH84-like
SwissprotQ7XHI95e-37BH084_ARATH; Transcription factor bHLH84
TrEMBLM7YLB10.0M7YLB1_TRIUA; Transcription factor bHLH84
STRINGTRIUR3_10349-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140022528
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-38bHLH family protein