PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_07297-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 313aa    MW: 34900.9 Da    PI: 6.2706
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_07297-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.13.2e-15128216397
           DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                      f+r+ws +De+ +L +l   ++++g+ p+   da++e + ++++ + +s+++l  K+++LK+++    kk         +kehd+  f+l+k++
  TRIUR3_07297-P1 128 FHRVWSTNDEVRILEALAAHQKEHGVLPQP--DALVEALAGKLDNRaYSSKELQGKVKSLKHRYVSAAKK-----YELPTKEHDRRLFDLCKIV 214
                      89***********************77666..5899***999987526899*****************99.....345689************* PP

           DUF573  96 Wg 97 
                      W 
  TRIUR3_07297-P1 215 WS 216
                      *6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.8E-20128216IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MAKKRGEKRP PPPPAASSEE THSGADESED EETIAVSRTP APKNPPPPPQ KGEESETSDE  60
EEEEEPSHAA PNTAPKKQPP PARQSEDSDS SDEEEDGGSE SDKDAPPPKP SPKQEAKAPD  120
AKKPRLAFHR VWSTNDEVRI LEALAAHQKE HGVLPQPDAL VEALAGKLDN RAYSSKELQG  180
KVKSLKHRYV SAAKKYELPT KEHDRRLFDL CKIVWSGHKY RGRAATASTA AAATAKANNH  240
EPKGFEEMCE LYPYLAEEVK KSMFKREFGK MDDDKARLLD EKIKKQRVQQ MKVELRRSDL  300
GREVTKAIMD MID
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2492760.0AK249276.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf33f24, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020179917.11e-158STOREKEEPER protein-like
TrEMBLM8A0M20.0M8A0M2_TRIUA; Uncharacterized protein
STRINGTRIUR3_07297-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67292737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.13e-08DNA-binding storekeeper protein-related transcriptional regulator