PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_05298-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 330aa    MW: 35107.1 Da    PI: 5.1604
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_05298-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.52.1e-26105165158
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                      +dDg +WrKYGqKe+ g+++pr+YYrCt++   gC ++k+v+r+++dp +++++Y+geH++
  TRIUR3_05298-P1 105 VDDGRSWRKYGQKEILGAQHPRAYYRCTYQktqGCAATKQVQRADDDPALFDVIYHGEHTC 165
                      58***************************98999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-2795166IPR003657WRKY domain
PROSITE profilePS5081121.85100163IPR003657WRKY domain
SuperFamilySSF1182904.58E-24104165IPR003657WRKY domain
SMARTSM007749.9E-38105167IPR003657WRKY domain
PfamPF031066.3E-26106165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0048527Biological Processlateral root development
GO:0005730Cellular Componentnucleolus
GO:0000987Molecular Functioncore promoter proximal region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MEAVHEGNGG GSGLVVTELS HIKELVKQLD VHLGGSPDLC KLLAQQIFAV TERSIGMISG  60
VSNTPSPLSG VSNTPFKLNK KRKTSEKGGR QIRVSSAGEG ADAPVDDGRS WRKYGQKEIL  120
GAQHPRAYYR CTYQKTQGCA ATKQVQRADD DPALFDVIYH GEHTCVHKTA AAAAGMVQPA  180
GKNPDAESLL QSLSSNLTVK TEGLTAAGAQ GWSATTPFSF SSPAVSGMTP PEQQHHPFST  240
PSTPENCFVS MPTSLEPSPA TSGSNHMCMT PFHAQSELQT MVSALVEATS MPPADTEEAA  300
FSYWGFDDSA LDVNILDEDV DNFDISAFFA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-24105165868OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00112ampDAPTransfer from AT2G46400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2865660.0DQ286566.1 Triticum aestivum WRKY transcription factor (WRKY) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200628.10.0WRKY transcription factor 6-like
TrEMBLM7YP800.0M7YP80_TRIUA; Putative WRKY transcription factor 46
STRINGTRIUR3_05298-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-35WRKY DNA-binding protein 46