PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_05123-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TALE
Protein Properties Length: 457aa    MW: 50628.5 Da    PI: 7.0157
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_05123-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.97.1e-082743111954
                      HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
         Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                      Fe   ++yp+  ++  LA++ gL+ +qV++WF N R +
  TRIUR3_05123-P1 274 FEHflHPYPNDVDKHILARQSGLSRSQVSNWFINARVR 311
                      5544589*****************************88 PP
2BELL91.77.2e-30129198372
             BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                      ++l+++ka+Lls++eeVd+ Y +y+e++++   sFeavag+g+a++Yt++A++a+SrhFrcL+da+++qi
  TRIUR3_05123-P1 129 MALERRKARLLSMIEEVDRCYWRYREKMRATEMSFEAVAGVGAAQVYTKMAMRAMSRHFRCLRDALVGQI 198
                      7899****************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.5E-4562196IPR006563POX domain
PfamPF075262.2E-3768194IPR006563POX domain
PROSITE profilePS5007111.272252315IPR001356Homeobox domain
CDDcd000863.11E-11255316No hitNo description
SMARTSM003891.0E-7255319IPR001356Homeobox domain
SuperFamilySSF466891.58E-16256322IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.7E-26258321IPR009057Homeodomain-like
PfamPF059202.3E-16272311IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MAMAFDHHGV FAPLHEDMPP RFGGADDRSW LPQSSTLSLY DTAGQHELQP FTVAPPSMMP  60
MQQPPFRLNS SRYLGPAREL LSEFCNLEGD AMNGGAMMRA PKQDGEVEAS SPACGPWGAN  120
PSVSSMDYMA LERRKARLLS MIEEVDRCYW RYREKMRATE MSFEAVAGVG AAQVYTKMAM  180
RAMSRHFRCL RDALVGQIRT LKKSMGESRD ADGMLVAPGA SKGDTPRLRV VDQCLRRQRA  240
FQQYGGGAAI ESCPWRPQRG LPERAVAVLR SWLFEHFLHP YPNDVDKHIL ARQSGLSRSQ  300
VSNWFINARV RLWKPMIEEM YAEETIQHDD GGTSSGRGEP APTDHHNNNL AACTTVTITG  360
DQNCHRLSGR NNPGDCFIPS SLVVDGGKFL HGYPSLRSDS GSGVVSLTLG LQQQQAFASP  420
AMIMQQQSSL MIGAEGEDMV LPYRNLMGSE LLHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5bng_A4e-15261319159Homeobox protein Meis2
5bng_B4e-15261319159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020149277.10.0homeobox protein BEL1 homolog
RefseqXP_020166134.10.0homeobox protein BEL1 homolog
TrEMBLM8AKP90.0M8AKP9_TRIUA; Homeobox protein BEL1-like protein
STRINGTRIUR3_05123-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63983547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.12e-96TALE family protein