PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_05004-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 422aa    MW: 45886.8 Da    PI: 7.1539
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_05004-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM348.7e-1120331123128
              NAM  23 vegkkleleevikevdiykvePwdLp.kkvka..eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfy.kg 111
                      +++ + +l   + +v+++++ P +L   k++a  +++e y+F+++     tg r+ r +   g+W+   + +++l+++++   lk+ L +  + 
  TRIUR3_05004-P1 203 LNAGSRPLLPKVYKVNVHSAPPYELVkGKMHApgGKQEFYYFHSHPAPG-TGGRRCRhVDGGGIWRPENR-TSILDADKSILLLKRKLSYMlTD 294
                      444455555668899**********733444443666888888877765.5556666388899***9987.6777779999*********9544 PP

              NAM 112 rapkgektdWvmheyrl 128
                      +   + +t W+m e++l
  TRIUR3_05004-P1 295 SGGVPARTGWCMAEFSL 311
                      566667*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.968181329IPR003441NAC domain
SuperFamilySSF1019413.92E-16199329IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MASDRGSDED EVGFPRDIFA AYVQVANELM ARRLVDGAAF GAELLHDLSS SPVAVPHARN  60
TTQPPSPLSR YRTTVLSRPN RCRNEKEKDC AYLNVIPANR LSSGLQATGE DSWAAPTWAE  120
EPGKASAAEA ERGKLATVVE ELVKCSRKRS RPVSFCPAQK VPTKGIKAAE TKVADVATAV  180
GGKAWDAKMS MADLEHFNLL KDLNAGSRPL LPKVYKVNVH SAPPYELVKG KMHAPGGKQE  240
FYYFHSHPAP GTGGRRCRHV DGGGIWRPEN RTSILDADKS ILLLKRKLSY MLTDSGGVPA  300
RTGWCMAEFS LENQHDNVDE MVLCILYRSN HSYPEISTTA STSLVAEFTL IAQGCDAAEE  360
DGVTIHESLG SPGSDMPSPG QAMDEAVGLD NLHERGLDKL IVSGSQSKWV HTQVKYPAKN  420
YS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM7ZA630.0M7ZA63_TRIUA; Uncharacterized protein
STRINGTRIUR3_05004-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43632158
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.11e-08NAC domain containing protein 64