PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_05004-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 422aa MW: 45886.8 Da PI: 7.1539 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34 | 8.7e-11 | 203 | 311 | 23 | 128 |
NAM 23 vegkkleleevikevdiykvePwdLp.kkvka..eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfy.kg 111 +++ + +l + +v+++++ P +L k++a +++e y+F+++ tg r+ r + g+W+ + +++l+++++ lk+ L + + TRIUR3_05004-P1 203 LNAGSRPLLPKVYKVNVHSAPPYELVkGKMHApgGKQEFYYFHSHPAPG-TGGRRCRhVDGGGIWRPENR-TSILDADKSILLLKRKLSYMlTD 294 444455555668899**********733444443666888888877765.5556666388899***9987.6777779999*********9544 PP NAM 112 rapkgektdWvmheyrl 128 + + +t W+m e++l TRIUR3_05004-P1 295 SGGVPARTGWCMAEFSL 311 566667*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.968 | 181 | 329 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.92E-16 | 199 | 329 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence Send to blast |
MASDRGSDED EVGFPRDIFA AYVQVANELM ARRLVDGAAF GAELLHDLSS SPVAVPHARN 60 TTQPPSPLSR YRTTVLSRPN RCRNEKEKDC AYLNVIPANR LSSGLQATGE DSWAAPTWAE 120 EPGKASAAEA ERGKLATVVE ELVKCSRKRS RPVSFCPAQK VPTKGIKAAE TKVADVATAV 180 GGKAWDAKMS MADLEHFNLL KDLNAGSRPL LPKVYKVNVH SAPPYELVKG KMHAPGGKQE 240 FYYFHSHPAP GTGGRRCRHV DGGGIWRPEN RTSILDADKS ILLLKRKLSY MLTDSGGVPA 300 RTGWCMAEFS LENQHDNVDE MVLCILYRSN HSYPEISTTA STSLVAEFTL IAQGCDAAEE 360 DGVTIHESLG SPGSDMPSPG QAMDEAVGLD NLHERGLDKL IVSGSQSKWV HTQVKYPAKN 420 YS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M7ZA63 | 0.0 | M7ZA63_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_05004-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4363 | 21 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56530.1 | 1e-08 | NAC domain containing protein 64 |