PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA32304 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | WRKY | ||||||||
Protein Properties | Length: 175aa MW: 20058.5 Da PI: 6.2417 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.5 | 1.8e-10 | 124 | 147 | 2 | 25 |
--SS-EEEEEEE--TT-SS-EEEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYY 25 +Dg++WrKYGqK++ +++fpr Y Tp57577_TGAC_v2_mRNA32304 124 EDGHQWRKYGQKKILNNDFPRYIY 147 7********************877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-9 | 110 | 148 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 9.649 | 118 | 156 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.27E-8 | 121 | 147 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.2E-5 | 123 | 155 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-9 | 124 | 155 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence Send to blast |
MENIENLAHG RGKVIDELLR GRELANQLRH LLNESGDIDH NNNDSTTPFA ENLLKEVLMT 60 FTNSLLFLNN NNLTSDVSDA QLTKSEDSLE SNCKSTSIVK ERRGCYKRRK VSQTWEKESE 120 QPEEDGHQWR KYGQKKILNN DFPRYIYLII HTCSAGLLLL LDSMVVFGFS HSTW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA32304 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003623638.1 | 4e-76 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A2K3NF97 | 9e-91 | A0A2K3NF97_TRIPR; WRKY transcription factor | ||||
STRING | AES79856 | 1e-75 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1995 | 34 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 3e-14 | WRKY DNA-binding protein 70 |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA32304 |