PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp_un0032_002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | GeBP | ||||||||
Protein Properties | Length: 256aa MW: 29326 Da PI: 5.316 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 97.4 | 1.3e-30 | 80 | 174 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsk.sqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 +fqrlwseeD++v+L G+++fk ktgk +d+++fye vk+si f+ ++ s l++Kir LK+K+ +k+k+ g ps++k+ d+k+fels +W Tp_un0032_002 80 YFQRLWSEEDDLVILNGMLKFKIKTGKTHNEDMHGFYESVKNSITFEGKNlSRLTNKIRTLKQKYMTKKKN---GVTPSVTKAYDHKCFELSDLVW 172 89********************************************9765489*************99999...********************** PP DUF573 97 gs 98 gs Tp_un0032_002 173 GS 174 95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 7.4E-24 | 81 | 173 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MTKKHDQPLQ DPPTASLSEE ETSGSSSEEE EGEEPETDSE SEPETTESPA ADSASLKKTK 60 KRPRYEKEAT TTETATKKSY FQRLWSEEDD LVILNGMLKF KIKTGKTHNE DMHGFYESVK 120 NSITFEGKNL SRLTNKIRTL KQKYMTKKKN GVTPSVTKAY DHKCFELSDL VWGSEVESPI 180 SEGGMVYETD WFMTFSLRGH IASFGIDEEH VKQKWSLLPV ETKTKLRNKW KMLEGEAVEV 240 LVQKIEFMHE VIPLFV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 55 | 62 | LKKTKKRP |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM313 | 28 | 181 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01370.1 | 2e-41 | DNA-binding storekeeper protein-related transcriptional regulator |