PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp3g31180 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | bZIP | ||||||||
Protein Properties | Length: 208aa MW: 23984 Da PI: 10.1075 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36 | 1.6e-11 | 137 | 188 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka..eieeLeekvkeLeaeNkaLkkeleelkk 54 +r +r++kNRe+A rsR+RK++ ++ eLe +++ L++eN +Lk + e+lk Tp3g31180 137 RRHKRMIKNRESAARSRARKQEcaYTNELELEIAHLQKENARLKRQEEQLKM 188 799******************5559*******************99999985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-10 | 128 | 188 | No hit | No description |
SMART | SM00338 | 3.9E-6 | 133 | 195 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.691 | 135 | 187 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 9.64E-23 | 137 | 193 | No hit | No description |
Pfam | PF00170 | 2.4E-9 | 137 | 188 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.86E-8 | 137 | 187 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 140 | 155 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence Send to blast |
MLSSAKHKIN HSAFTNSSSA TSLSHLHSQA KNMTQVTMEE VWKEINLASL HQHRQLNIDH 60 EPMLRNQNPN NSIFKDFLNM PLNQEPPPSS SSLPLPPPAT VLCLNPYSIT THFDESARYT 120 CFGKKRGQDS DESRGERRHK RMIKNRESAA RSRARKQECA YTNELELEIA HLQKENARLK 180 RQEEQLKMAE ATQHQTKKTL QRSWTAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:23543784}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp3g31180 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006409247.2 | 1e-123 | bZIP transcription factor 27 | ||||
Swissprot | Q7PCC6 | 4e-91 | FDP_ARATH; bZIP transcription factor 27 | ||||
TrEMBL | V4LJI6 | 1e-118 | V4LJI6_EUTSA; Uncharacterized protein (Fragment) | ||||
STRING | XP_006409247.1 | 1e-119 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 5e-81 | basic region/leucine zipper motif 27 |
Publications ? help Back to Top | |||
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