PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp3g27500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | ERF | ||||||||
Protein Properties | Length: 89aa MW: 9952.3 Da PI: 5.0818 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.6 | 3.1e-13 | 32 | 78 | 7 | 56 |
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +w+ +g+W AeI+dp g r r +lg+f e+Aa+a+++a+ +l ge Tp3g27500 32 CWCFVSGKWSAEIWDP---GLRVRRWLGTFPKMEMAARAYDEAAASLTGE 78 577779*********9...556999*********************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 15.923 | 22 | 86 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.6E-6 | 33 | 78 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.03E-12 | 36 | 80 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 5.9E-16 | 37 | 79 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.0E-9 | 37 | 87 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence Send to blast |
MVFAGPGWKA GKSKPGEMGD WFITGVQCQE RCWCFVSGKW SAEIWDPGLR VRRWLGTFPK 60 MEMAARAYDE AAASLTGEYQ REVAVSGDD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp3g27500 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020871492.1 | 2e-14 | ethylene-responsive transcription factor ERF122 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20350.1 | 2e-11 | ERF family protein |