PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp2g15130 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | ERF | ||||||||
Protein Properties | Length: 336aa MW: 37111.5 Da PI: 4.689 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.6 | 1.8e-14 | 126 | 173 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 ++ GVr++k +g+W+AeIr+p + +r +lg++ t e+Aa a+ +++ Tp2g15130 126 TKPVGVRQRK-WGKWAAEIRHPI----TkTRTWLGTYETLEQAADAYATKKLE 173 5789*****9.**********72....36******************877665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.5E-9 | 126 | 168 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.65E-18 | 126 | 167 | No hit | No description |
PROSITE profile | PS51032 | 18.202 | 127 | 184 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.7E-13 | 127 | 195 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.7E-6 | 128 | 139 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.41E-14 | 129 | 174 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 5.3E-19 | 130 | 176 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.7E-6 | 150 | 166 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence Send to blast |
MAEPKKRSSF QATKPCKKPK KKTFQLNRLP GLSEDLKTMR KIRFVVNDPY ATDYSSSEED 60 EMNQRRKRYV CEIDRPFSQA TTQAESESSY CQESHNDGTK AKISTCSKKK VLGNKTSQVV 120 GRSSVTKPVG VRQRKWGKWA AEIRHPITKT RTWLGTYETL EQAADAYATK KLEFDALAAA 180 TSAASSNSTA SNESESLVSA SGSNVEAVSS TDLDMKVLDS TIDAEAGKSK KASFDFNFAD 240 LQIPDMGCFI DESLIPNACE LDFLLTEEND QLLDDYCGID DMNIIGLEYD GPSELPDYDF 300 SDVEIDLGLI GTSIDKFAFV DHLATTTTTP LNIACP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp2g15130 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK353319 | 0.0 | AK353319.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-28-P02. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006395614.1 | 0.0 | ethylene-responsive transcription factor ERF119 | ||||
Swissprot | Q9LUA2 | 1e-169 | EF119_ARATH; Ethylene-responsive transcription factor ERF119 | ||||
TrEMBL | E4MXS2 | 0.0 | E4MXS2_EUTHA; mRNA, clone: RTFL01-28-P02 | ||||
TrEMBL | V4K5P7 | 0.0 | V4K5P7_EUTSA; Uncharacterized protein | ||||
STRING | XP_006395614.1 | 0.0 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2537 | 26 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25890.2 | 1e-166 | ERF family protein |