PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010556373.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 281aa    MW: 31118.8 Da    PI: 5.2546
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010556373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.35e-1586133152
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                     s+  GVr++k +g+W+AeIr+p     + +r +lg++ t eeAa a+   +++
  XP_010556373.1  86 SKPIGVRQRK-WGKWAAEIRHPI----TkARTWLGTYQTLEEAANAYASKKLE 133
                     6889*****9.**********72....36******************877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-986131IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-1587134IPR016177DNA-binding domain
PROSITE profilePS5103217.29387146IPR001471AP2/ERF domain
PRINTSPR003671.4E-68899IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-1990134IPR001471AP2/ERF domain
SMARTSM003803.1E-1290149IPR001471AP2/ERF domain
CDDcd000181.08E-1890132No hitNo description
PRINTSPR003671.4E-6110126IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MTRKIRIVVN DPYATDCSSS EDEMMGREKV PKLKRLVREI NLPIYQAALS EPQASSCRGG  60
TKPKTPTWNK KSPSKISRER RSGGVSKPIG VRQRKWGKWA AEIRHPITKA RTWLGTYQTL  120
EEAANAYASK KLEFDSLASG QNPNLGESSL SNSNASHESD SLASASASAS RSNDVDCIKK  180
AAAASEPGEL IKGAFDFNFA DVQIPELGSF MDEPLLSNAS SELEFLFMEE SGHFLDDYCC  240
IYDDDDHHMD MPKRDFSDIE IDLSDHKLNP LDIACPISFC S
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010556373.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010556373.10.0PREDICTED: ethylene-responsive transcription factor ERF119
SwissprotQ9LUA23e-62EF119_ARATH; Ethylene-responsive transcription factor ERF119
TrEMBLE4MXS24e-81E4MXS2_EUTHA; mRNA, clone: RTFL01-28-P02
TrEMBLV4K5P74e-81V4K5P7_EUTSA; Uncharacterized protein
STRINGXP_010556373.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25372671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.27e-49ERF family protein