PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010554461.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | EIL | ||||||||
Protein Properties | Length: 624aa MW: 71265.6 Da PI: 6.3725 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 438.6 | 5.5e-134 | 74 | 448 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 eel++r w+d+ +lkrlke +k+ k g+kk + +eqar+k+msraQDgiLkYMlk+mevcnaqGfvYgi++e+gk+v+g+sd+Lr+WW XP_010554461.1 74 EELERRLWRDKLRLKRLKELSKNGKVGKT--DGSKKPLQLQEQARKKTMSRAQDGILKYMLKIMEVCNAQGFVYGIVQENGKTVTGSSDNLREWW 166 8*******************999654554..5899999********************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 k+kv+f rngpaai+k+ +n +++ ++ + s+++ l elqDTtlgSLLsalmqhc+ppqrrfpl+kgv+pPWWPtGke+ww +l+l++d XP_010554461.1 167 KDKVRFHRNGPAAIAKHRRDNSSEPDQDLGSVFAGSTPNLLLELQDTTLGSLLSALMQHCSPPQRRFPLDKGVAPPWWPTGKEDWWVQLSLPEDS 261 *****************9999998888888999************************************************************** PP -...-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.....XXXX...XXXX CS EIN3 191 g..tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.....slrk...qspk 273 + +ppykkphdlkk+wkv+vL +vikhmsp+i++ir+l+rqsk+lq+km+a+es ++l+ +n+ee++++++++ + ++ + XP_010554461.1 262 RgcPPPYKKPHDLKKVWKVGVLMSVIKHMSPDISKIRRLVRQSKCLQEKMTARESSMWLAAINREEAIVRELYPGyfVKefssfP--VpgiNDCD 354 **************************************************************************98733354331..14446666 PP XXXXXXXXXXXXXXXXXX.XXXXXXXXXX.................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXX CS EIN3 274 vtlsceqkedvegkkeskikhvqavktta.................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisq 351 v++ ++ ++dv+g + ++ +v+++ +++ ++++v+krk + + + +v+ ++tc++ +++se +++f d+ s+++ XP_010554461.1 355 VIVPTG-EYDVDGIETEQYPNVEEHFREEkpnrydfgigtretvvnNLDIVQKRKLEDDLDLMVHH--NIYTCENHLCPYSENRMGFDDRISRDN 446 666666.99***555555444544444445567*********************955444444443..47************************* PP XX CS EIN3 352 ne 353 ++ XP_010554461.1 447 HQ 448 98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.2E-120 | 74 | 327 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.5E-68 | 201 | 335 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 6.02E-58 | 205 | 331 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 624 aa Download sequence Send to blast |
MMSHLILESC AGKMNQESNE KPSCWNIFNG TETCGDLDLY SAPFLDRNVC FHQTEQESAA 60 TVADDLTDED LEMEELERRL WRDKLRLKRL KELSKNGKVG KTDGSKKPLQ LQEQARKKTM 120 SRAQDGILKY MLKIMEVCNA QGFVYGIVQE NGKTVTGSSD NLREWWKDKV RFHRNGPAAI 180 AKHRRDNSSE PDQDLGSVFA GSTPNLLLEL QDTTLGSLLS ALMQHCSPPQ RRFPLDKGVA 240 PPWWPTGKED WWVQLSLPED SRGCPPPYKK PHDLKKVWKV GVLMSVIKHM SPDISKIRRL 300 VRQSKCLQEK MTARESSMWL AAINREEAIV RELYPGYFVK EFSSFPVPGI NDCDVIVPTG 360 EYDVDGIETE QYPNVEEHFR EEKPNRYDFG IGTRETVVNN LDIVQKRKLE DDLDLMVHHN 420 IYTCENHLCP YSENRMGFDD RISRDNHQLT CVYRGNSFGV GAPNFHVNDI KAMTFNQPCV 480 QIKQAVPPSK PFTPSFGLQN LMTPEDGKTT IYDLCSSYNN AFQSIKSENE AVAGEVQSIL 540 QPNRQEDQMN LHHLYRQVNN NLFERPEAMH GDIFSQRFDS FKGMNPSSPG PNQNSMLASL 600 VRSNVTQTVG VEHLLKQDPS VWFQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 4e-68 | 202 | 335 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 4e-68 | 202 | 335 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010554461.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010554461.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_010554462.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_010554463.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 1e-166 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A061GXV6 | 0.0 | A0A061GXV6_THECC; Ethylene insensitive 3 family protein | ||||
STRING | XP_010554461.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14719 | 16 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-149 | ETHYLENE-INSENSITIVE3-like 1 |