PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010551835.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family WRKY
Protein Properties Length: 1024aa    MW: 113565 Da    PI: 9.448
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010551835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.21.4e-32191247259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgynWrKYGqK++kg efprsYY+Ct+a+Cpvkkkvers+ d+++++i+Y+g+Hnhe
  XP_010551835.1 191 DDGYNWRKYGQKPIKGCEFPRSYYKCTHASCPVKKKVERSS-DGQITQIIYKGQHNHE 247
                     8****************************************.***************8 PP
2WRKY105.33.2e-33346404159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k+ver+++dpk+v++tYeg+Hnh+
  XP_010551835.1 346 LDDGYRWRKYGQKVVKGNPHPRSYYKCTTAGCTVRKHVERASTDPKAVITTYEGKHNHD 404
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-29183249IPR003657WRKY domain
PROSITE profilePS5081124.719185249IPR003657WRKY domain
SuperFamilySSF1182901.96E-25188249IPR003657WRKY domain
SMARTSM007742.3E-36190248IPR003657WRKY domain
PfamPF031062.6E-25191247IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.8E-36331406IPR003657WRKY domain
SuperFamilySSF1182903.92E-29338406IPR003657WRKY domain
PROSITE profilePS5081138.893341406IPR003657WRKY domain
SMARTSM007744.4E-39346405IPR003657WRKY domain
PfamPF031067.5E-26347404IPR003657WRKY domain
SuperFamilySSF561121.62E-90541841IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.206.3E-33544646No hitNo description
PfamPF000692.3E-69548833IPR000719Protein kinase domain
CDDcd078401.52E-143548833No hitNo description
PROSITE profilePS5001145.149548833IPR000719Protein kinase domain
SMARTSM002203.9E-92548833IPR000719Protein kinase domain
PROSITE patternPS001070554577IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.103.4E-55647903No hitNo description
PROSITE patternPS001080668680IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1024 aa     Download sequence    Send to blast
MAQDDAPSMR TTALVAPTRP TITIPNRPPA TDAPPIFGGG GDGLSLSPGP LSFVSSLFTD  60
NYQELTPTSE NQRGFFSQLL SGCTASPSAA AGFSGDARSS GFGLSTLFTI PSGFSPSGLL  120
NSPDFFPSPR QSSYGMPANQ QQPVQAFFPQ PQPLPQSQSQ PQPQTFALQR QPPSTAYSRS  180
YNVVSVDKPA DDGYNWRKYG QKPIKGCEFP RSYYKCTHAS CPVKKKVERS SDGQITQIIY  240
KGQHNHERPL NRRGGGGGRD SGDFRVFGNG SVQMMESSDD SGYGRSKDHD DDDDDDEEEE  300
ENDDDGEDIH ASKIRKIGGN SGVSMSHRTV TEPKIIVQTR SEVDLLDDGY RWRKYGQKVV  360
KGNPHPRSYY KCTTAGCTVR KHVERASTDP KAVITTYEGK HNHDVPTARN AATGTDHRRI  420
ALPALDPFIR PGPRPAPTPG DSPLLTSRLI LMGCLNSKLS SPGPRHLRRK SSTSAAPAIA  480
PPPPHRQIAG GSNQEFSRPP VGTSGLSLRS GLSRANVEVD PAAGWPTWLT SAAPEAVHGW  540
FPLCAEGFEK LEKIGQGTYS SVFRAREVGT GRTVALKKIR VHNFETENIR FIAREISILR  600
RLDHPNIMKL EGIIASRNSN SMYFVFEYME HDLEGLCSSP DIKFTEAQIK CYMKQLLWGV  660
EHCHLRGIMH RDIKASNILV NNKGILKLAD FGLANIVTSR NKNHLTSRVV TLWYRAPELL  720
MGSTSYGVSV DLWSVGCVFA EILTGGPVLK GRTEIEQLHK IYKLCGSPPE DFWEKTRLHP  780
QTKMFKPQHS YGGCLRERFE EFPTTAVNLL ETLLSIDPEK RRTSSSALMS EYFTTKPYPC  840
DPSTLPKYPP NKEMDAKHRE ELQRRRRVSI KKRDNLSSKK PRNPHKPLRY PPNFSKMPTQ  900
QENAEREKQL FIQTPSEISQ ATATMDRTDL RHTGLSHTTA PPASGSAWTK NRKENDGVST  960
LTYNQPSSDS HVSGTSMVFA KNTFGLSVLN QDKKSFPRPH VSSDVWFSGV LHKKAQEGLG  1020
QEEW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5efq_A5e-785408785347Cyclin-dependent kinase 13
5efq_C5e-785408785347Cyclin-dependent kinase 13
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010551835.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010551835.10.0PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinase 12
TrEMBLV5RF870.0V5RF87_BRACM; WRKY transcription factor 58
STRINGXP_010551835.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM13105810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01080.11e-97WRKY DNA-binding protein 58