PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010544313.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | EIL | ||||||||
Protein Properties | Length: 615aa MW: 69614.6 Da PI: 5.4336 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 493.6 | 1e-150 | 52 | 425 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el++r w+d+ +lkrlke++k+ +e ++++k++ s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipe+gkpv+gasd+Lr+WW XP_010544313.1 52 DELERRVWRDKLRLKRLKEQSKS----REG-VDSAKQRLSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWW 141 79*******************98....677.9999************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 k+kv+fdrngpaai+kyqa+n+i++g+++ + ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtGke+ww++lgl+kdq XP_010544313.1 142 KDKVRFDRNGPAAIAKYQAENNIPGGSDEVKNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGKEEWWPQLGLPKDQ 236 ******************************999************************************************************** PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...XXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...slrkqspkvtlsceqke 282 g+ppykkphdlkkawkv+vLtavikhm p+i++ir+l+rqsk+lqdkm+akes+++l+++nqee+++++++++s s++ +s ++ +++ ++ XP_010544313.1 237 GPPPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARDLYPESCphlSSSGGSGSLLINDCSEF 331 *************************************************************************5444566669************ PP XXX.XXXXXX.XXXXXXXXXX.............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXX CS EIN3 283 dve.gkkeskikhvqavktta.............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadkn 347 dve ++ke++ +v+ +k ++ ++++ +krk +++ +++ + +c++ q+++s++++ f+d++ XP_010544313.1 332 DVEgVDKEPS-YEVEDCKPEKvidprnfgmpkmhmiqphfpvkgeeatggNLEFMKKRK-----LNSMLDRR-IFNCENRQCPHSQMNMAFHDRT 419 ***5566666.78999999889***********************99999999999998.....45555565.59******************** PP XXXXXX CS EIN3 348 sisqne 353 s+++++ XP_010544313.1 420 SRDNHQ 425 ****98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.2E-128 | 52 | 300 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.7E-75 | 174 | 310 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.57E-61 | 179 | 303 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 615 aa Download sequence Send to blast |
MMMFNEMGMC GNADFVSSVS LGGIDVCAAP QEEVELVVVE DDYTDEEEID VDELERRVWR 60 DKLRLKRLKE QSKSREGVDS AKQRLSQEQA RRKKMSRAQD GILKYMLKMM EVCKAQGFVY 120 GIIPENGKPV TGASDNLREW WKDKVRFDRN GPAAIAKYQA ENNIPGGSDE VKNPIGPTPH 180 TLQELQDTTL GSLLSALMQH CDPPQRRFPL EKGVPPPWWP TGKEEWWPQL GLPKDQGPPP 240 YKKPHDLKKA WKVGVLTAVI KHMFPDIAKI RKLVRQSKCL QDKMTAKESA TWLAIINQEE 300 SLARDLYPES CPHLSSSGGS GSLLINDCSE FDVEGVDKEP SYEVEDCKPE KVIDPRNFGM 360 PKMHMIQPHF PVKGEEATGG NLEFMKKRKL NSMLDRRIFN CENRQCPHSQ MNMAFHDRTS 420 RDNHQLVCPF RDSSISYGAS EFHVSEVKPV VIPQHFTHPR PAAPAMNPVQ PFDLSGFGVP 480 EDGQKMITEL MSMYDRNFQG NQATSMVENQ SLNLQPKARN DELQQHFNHS EGSSIEGNFL 540 EDLPIKNMFS QGNNGIQFPN PQSDSAHNNS NNGGFQIVFD STPFDLASFD YRDDLQAVGM 600 DGTPEQQQQD VSIWF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-88 | 178 | 310 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-88 | 178 | 310 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010544313.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010544313.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | R0I181 | 0.0 | R0I181_9BRAS; Uncharacterized protein | ||||
STRING | XP_010544313.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2135 | 28 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |