PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010544312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | EIL | ||||||||
Protein Properties | Length: 632aa MW: 71283.4 Da PI: 4.9043 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 489.4 | 2e-149 | 50 | 425 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el++r w+d+ +lk lke++k+ ke ++++k+++s+e arrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipe+gkpv+gasd+Lr+WW XP_010544312.1 50 DELERRVWRDKLRLKCLKEQSKS----KEG-VDSAKQRQSQELARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWW 139 79*****************9998....777.9999************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 k+kv+fdrngpaai+kyqa+n+i+++++ ++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+Gke+ww++lgl+kdq XP_010544312.1 140 KDKVRFDRNGPAAIAKYQAENNIPGSNEVKNP-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPSGKEEWWAQLGLPKDQ 233 *************************9988877.9************************************************************* PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...XXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...slrkqspkvtlsceqke 282 g+ppykkphdlkkawkv+vLtavikhm p+i++ir+l+rqsk+lqdkm+akes+++l+++nqee+++++++++s s++ +s ++ ++ +++ XP_010544312.1 234 GPPPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLAQELYPESCppiSSSGGSGLLFGNECSEY 328 *************************************************************************44446666799999999999** PP XXX.XXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXX CS EIN3 283 dve.gkkeskikhvqavktta............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadkns 348 dve ++ke++ +++++k ++ ++++v kr++ + ++ ++ + + tcqs q+++s +l+f+d+ XP_010544312.1 329 DVEgVDKEPN-YDMEEHKPENvinppdfgmanmhmvqqhfsvkeelitaNMEFVGKRRSDGDLNTVMNPR--IFTCQSPQCPHSAINLGFQDRGT 420 ***6677777.88999999999***********************************9766666666655..69********************* PP XXXXX CS EIN3 349 isqne 353 +++++ XP_010544312.1 421 RDNHQ 425 ***98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.2E-127 | 50 | 297 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 6.4E-75 | 171 | 307 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 5.36E-61 | 176 | 300 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 632 aa Download sequence Send to blast |
MMMFNEMGMR GNMDFFSSGP LAEVDLCPAR QAGTESFVED DFTEEEIDVD ELERRVWRDK 60 LRLKCLKEQS KSKEGVDSAK QRQSQELARR KKMSRAQDGI LKYMLKMMEV CKAQGFVYGI 120 IPENGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQAEN NIPGSNEVKN PIGPTPHTLQ 180 ELQDTTLGSL LSALMQHCDP PQRRFPLEKG VPPPWWPSGK EEWWAQLGLP KDQGPPPYKK 240 PHDLKKAWKV GVLTAVIKHM FPDIAKIRKL VRQSKCLQDK MTAKESATWL AIINQEESLA 300 QELYPESCPP ISSSGGSGLL FGNECSEYDV EGVDKEPNYD MEEHKPENVI NPPDFGMANM 360 HMVQQHFSVK EELITANMEF VGKRRSDGDL NTVMNPRIFT CQSPQCPHSA INLGFQDRGT 420 RDNHQLVCPY RDSCLAYGAS KFQVGEVKPA VALQPCTQSR PVAMPMNSAA QPIDLTGLGV 480 PEDGQKMITE LMDMYDRNVQ NNQASSMVEN ESMMLQPKAQ NHQEQNQFGN RDGNMVEGSF 540 FEDLNFPNSC NNNNSSSQMY MQGNSEFKFM SSPFAATQNS DDNNGSSNSP LEFVFDSTPF 600 DLASFDDRND MQAVGMEGMP PKRQERDVSI WF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 7e-88 | 175 | 307 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 7e-88 | 175 | 307 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010544312.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010544311.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_010544312.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | R0I181 | 0.0 | R0I181_9BRAS; Uncharacterized protein | ||||
STRING | XP_010544311.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |