PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010543659.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 708aa MW: 76847.3 Da PI: 6.4698 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.6 | 2.3e-12 | 214 | 276 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e++ kr r+++NRe+A sR RKk+++eeLe kvk + + +L ++++ + e a+l+++v XP_010543659.1 214 EEDEKRKARLMRNRESAHLSRTRKKQYVEELEGKVKRMHSTIAELNNRISYIVAENAALRQQV 276 6788**********************************************9999999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.3E-14 | 214 | 278 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.1E-10 | 215 | 276 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.231 | 216 | 276 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-15 | 218 | 277 | No hit | No description |
SuperFamily | SSF57959 | 2.94E-11 | 218 | 276 | No hit | No description |
CDD | cd14704 | 1.45E-19 | 219 | 270 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006990 | Biological Process | positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0005635 | Cellular Component | nuclear envelope | ||||
GO:0005654 | Cellular Component | nucleoplasm | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016020 | Cellular Component | membrane | ||||
GO:0048471 | Cellular Component | perinuclear region of cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 708 aa Download sequence Send to blast |
MTESLIAPPP AMPDPSPNFL SESDDPLLMP LDPLFLSAGD PISMETLGSD LGLILDENGD 60 FDFSIDLPED FFDFPSDTEP SLIPDIPGNL SPGIGNSENF DDQGPNEVEN NQNCCSLETR 120 SGGREPEGCS VSDRPLGVYS PASSHGSGGF VSGASGTHNA LSPDSIDVGF DQKVEDGFDG 180 RSSVPKRKKE KGDSDNSRSS KYHKSDEKTS TPNEEDEKRK ARLMRNRESA HLSRTRKKQY 240 VEELEGKVKR MHSTIAELNN RISYIVAENA ALRQQVSGGA AAAAHAASMY PPMAAAPMPY 300 PWMPYPPYPC RPYGSQVPLV PIPKLKTQPV LGSKAKKPEG RKDAAKSKTK KVASISFVGI 360 LFVIFLFGAL VPFVNVNYGR NGGSSGGLSI YGRDRFYDEH MGRVLMVNGR FNGSDISRGS 420 RISNGNSHCS SRIHSDRGGC GGADYHSNMQ EQGQANALGN ASEPLFASLY VPRNDKLVKI 480 DGNLIIHSVL ASEKAMASEK NASSETISRR ETDLAIPHEL SSALALPEIR GNLAVLPHLY 540 RNTEEHRKAL PSSAADGKNP HQWFHEGISG ALMNYSMCTE VFQFDIAPGA IIPSTASVSN 600 ATQCNKKMNR RFLEGIPLPL TASELNITAN KTGKDSRNEN IEGNRNKPSS SMVVSVLLDP 660 REVADSETDR VMPPKPFSRI FVVVLLDSVK YVTYSCVLPR PGFHFVAT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in ER stress responses. Functions as a stress sensor and transducer in ER stress signaling pathway. After proteolysis by SBT6.1 (S1P) and S2P, the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones (PubMed:18156219, PubMed:18634751, PubMed:18849477, PubMed:20876872). Following ER stress, activates proteins involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:18156219, ECO:0000269|PubMed:18634751, ECO:0000269|PubMed:18849477, ECO:0000269|PubMed:20876872}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00345 | DAP | Transfer from AT3G10800 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010543659.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock. {ECO:0000269|PubMed:18849477}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010543659.1 | 0.0 | PREDICTED: bZIP transcription factor 28 | ||||
Swissprot | Q9SG86 | 0.0 | BZP28_ARATH; bZIP transcription factor 28 | ||||
TrEMBL | E4MX70 | 0.0 | E4MX70_EUTHA; mRNA, clone: RTFL01-21-B04 | ||||
TrEMBL | V4M298 | 0.0 | V4M298_EUTSA; Uncharacterized protein | ||||
STRING | XP_010543659.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14397 | 18 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10800.1 | 0.0 | bZIP family protein |