PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010538193.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

VOZ

Protein Properties

Length: 473aa MW: 52965.7 Da PI: 5.4932

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010538193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	414.7	1.6e-127	202	420	1	217
VOZ 1 pppsaflgpkcalwdctrpaq.gsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaae 94 pppsaflgpkc+lwdc+rpa g++w++dycssfha+la+neg+pg++p++rp+gi+lkdgllfaalsak++gk+vgipecegaatakspwna+e XP_010538193.1 202 PPPSAFLGPKCSLWDCPRPATlGFDWFHDYCSSFHAALAFNEGPPGMNPIVRPGGIGLKDGLLFAALSAKADGKDVGIPECEGAATAKSPWNAPE 296 89***************965********************************************************************* PP VOZ 95 lfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelkl 189 +fdls+lege irewlffdkprrafesgnrkqrslpdy grgwhesrkq+m+efgglkrsyymdpqp+ +fewhlyeyein+++a+alyrlelkl XP_010538193.1 297 IFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYCGRGWHESRKQIMNEFGGLKRSYYMDPQPLRHFEWHLYEYEINKCEACALYRLELKL 391 ******************************************************************************************9 PP VOZ 190 vd.ekksakgkvskdsladlqkklgrlta 217 + +kk++kgk s+ds+adlq ++grlta XP_010538193.1 392 AAvGKKNSKGKNSNDSVADLQTQMGRLTA 420 75389********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence Send to blast
MTGKRIKTSC VSASHKLFKD KAKNRVDDLQ GMLTDLQFAR KESRTTDVTL LEEQVHQMLR 60 EWKAELNEPF PASSFHQGGA FGSFSSDICQ LLQLCDEEDD ATSKLAAPKP EPSDRVLEVG 120 NNYIFQGGYD LVQEKPENGF PLPDHCKDFD GSAHLEYHHQ YDLQLELEPD FNNGGFMDGT 180 GYGGEESLHI STLMPPTISI CPPPSAFLGP KCSLWDCPRP ATLGFDWFHD YCSSFHAALA 240 FNEGPPGMNP IVRPGGIGLK DGLLFAALSA KADGKDVGIP ECEGAATAKS PWNAPEIFDL 300 SVLEGEIIRE WLFFDKPRRA FESGNRKQRS LPDYCGRGWH ESRKQIMNEF GGLKRSYYMD 360 PQPLRHFEWH LYEYEINKCE ACALYRLELK LAAVGKKNSK GKNSNDSVAD LQTQMGRLTA 420 DNNKRCIIKV RPKVTGKMPG PKPYPVQNMT DPTNDDDKLQ YGVAEEYSYL VGS

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence Send to blast

MTGKRIKTSC VSASHKLFKD KAKNRVDDLQ GMLTDLQFAR KESRTTDVTL LEEQVHQMLR  60
EWKAELNEPF PASSFHQGGA FGSFSSDICQ LLQLCDEEDD ATSKLAAPKP EPSDRVLEVG  120
NNYIFQGGYD LVQEKPENGF PLPDHCKDFD GSAHLEYHHQ YDLQLELEPD FNNGGFMDGT  180
GYGGEESLHI STLMPPTISI CPPPSAFLGP KCSLWDCPRP ATLGFDWFHD YCSSFHAALA  240
FNEGPPGMNP IVRPGGIGLK DGLLFAALSA KADGKDVGIP ECEGAATAKS PWNAPEIFDL  300
SVLEGEIIRE WLFFDKPRRA FESGNRKQRS LPDYCGRGWH ESRKQIMNEF GGLKRSYYMD  360
PQPLRHFEWH LYEYEINKCE ACALYRLELK LAAVGKKNSK GKNSNDSVAD LQTQMGRLTA  420
DNNKRCIIKV RPKVTGKMPG PKPYPVQNMT DPTNDDDKLQ YGVAEEYSYL VGS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010538193.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010538193.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X2
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	V4K8R3	0.0	V4K8R3_EUTSA; Uncharacterized protein
STRING	XP_010538191.1	0.0	(Tarenaya hassleriana)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]