PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010538117.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 433aa MW: 45708.1 Da PI: 10.1112

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010538117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.1	2.1e-14	356	407	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+ + e+ ++ XP_010538117.1 356 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRRKQAEMVEMQ 407 79****************************************7766555554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.7E-13	352	416	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.427	354	403	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.9E-14	356	405	No hit	No description
SuperFamily	SSF57959	1.13E-10	356	405	No hit	No description
Pfam	PF00170	4.1E-12	356	407	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.08E-28	356	410	No hit	No description
PROSITE pattern	PS00036	0	359	374	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence Send to blast
MGGYLNFNNF GNEPPGDVGG GSGGGGMNRP PGNVPLNRQG SIYSLTFDEF QSSLGKDFGS 60 MNMDELLKNI WSAEETQAMA STSGVEAGAV RGQEGLQRQG SLTLPRTLSQ KTVDEVWKDI 120 SKDYTTATAS KDINNGTGGS GMPQRQQTLG EITLEEFLVR AGVVREETQV GGKVNNGGYF 180 GDTSHSGGNN SGSVLGFQQA SRVSGLMGNL GPESGNQMSV QNSILPLNVN GVRSSTQQQP 240 IVPKQPGFGY GTQMTLPGGQ INNSHGIRGG LMGIADQCLG GNAGLVQSSG LMVGGGLGLA 300 GAMGVGGVSP VTPLSSDGIG KSNNGDTSSV SPSPYMFSGG VRGRKRSGAV EKVVERRQRR 360 MIKNRESAAR SRARKQAYTM ELEAEVAKLK EENQELRRKQ AEMVEMQKNQ ANEVKNVKGG 420 PMKRLRRTQT GPW

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence Send to blast

MGGYLNFNNF GNEPPGDVGG GSGGGGMNRP PGNVPLNRQG SIYSLTFDEF QSSLGKDFGS  60
MNMDELLKNI WSAEETQAMA STSGVEAGAV RGQEGLQRQG SLTLPRTLSQ KTVDEVWKDI  120
SKDYTTATAS KDINNGTGGS GMPQRQQTLG EITLEEFLVR AGVVREETQV GGKVNNGGYF  180
GDTSHSGGNN SGSVLGFQQA SRVSGLMGNL GPESGNQMSV QNSILPLNVN GVRSSTQQQP  240
IVPKQPGFGY GTQMTLPGGQ INNSHGIRGG LMGIADQCLG GNAGLVQSSG LMVGGGLGLA  300
GAMGVGGVSP VTPLSSDGIG KSNNGDTSSV SPSPYMFSGG VRGRKRSGAV EKVVERRQRR  360
MIKNRESAAR SRARKQAYTM ELEAEVAKLK EENQELRRKQ AEMVEMQKNQ ANEVKNVKGG  420
PMKRLRRTQT GPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010538117.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010538116.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Refseq	XP_010538117.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-162	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	I6ZMF5	1e-164	I6ZMF5_EUTSA; Abscisic acid responsive elements-binding factor 2
STRING	XP_010538116.1	0.0	(Tarenaya hassleriana)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-143	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]