PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010533482.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 168aa    MW: 18683.1 Da    PI: 7.5806
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010533482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.71e-124081546
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                    ++ +rk +NRe+ArrsR RK++ ++ L+  +++L +eN + +
  XP_010533482.1 40 RKWKRKLSNRESARRSRMRKQKHLDDLTAQIANLRKENGQII 81
                    5679**********************************8876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-1636100IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.3E-1037115No hitNo description
PROSITE profilePS5021710.03638101IPR004827Basic-leucine zipper domain
PfamPF001701.4E-94081IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.45E-114092No hitNo description
CDDcd147022.61E-184391No hitNo description
PROSITE patternPS0003604358IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MNKFEMGSST TTSGTYSTVL QNSGSESDLR RQESNLIEER KWKRKLSNRE SARRSRMRKQ  60
KHLDDLTAQI ANLRKENGQI IAGITVATQH YIVLEAENSV LRAQLLELNH RLQSLNEIVE  120
FIDAAGCPGG GAEADLLEGV VVNTLNLGFF NQVPPIMAAT AADIFHCR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15259RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010533482.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010533482.11e-122PREDICTED: bZIP transcription factor 44-like
SwissprotC0Z2L52e-66BZP44_ARATH; bZIP transcription factor 44
TrEMBLV4M8Y12e-67V4M8Y1_EUTSA; Uncharacterized protein
STRINGXP_010533482.11e-122(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.15e-64basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]