PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010527692.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 462aa    MW: 51141.5 Da    PI: 7.6253
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010527692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.43e-08157219163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     eke +r rr   NRe+Ar   +R++a +eeL +k+  L+ eN +Lk e +   ke ++l++ +
  XP_010527692.1 157 EKEERRIRRILANRESARQTIRRRQALCEELNRKASDLSYENAQLKREKDWALKEFQSLEMIN 219
                     78999*******************************************999999999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-9157221IPR004827Basic-leucine zipper domain
PfamPF001704.5E-7157219IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703159222IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.0E-6161227No hitNo description
SuperFamilySSF579598.33E-6161216No hitNo description
CDDcd147025.93E-13162213No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MELEQVSSCC SSSSPSPSSS AASDSSPLGE GAADRTELEA AEALADLAQL ALVREKVVES  60
AAKWGRKGKR VRKRVKNESP PCNPVLKPAD SEPPASDPAE ERAVKEEQEA QAIGRDLTIV  120
PVKTEVDEET PKQLLASTLK CRSSGGGRWR QNLSEAEKEE RRIRRILANR ESARQTIRRR  180
QALCEELNRK ASDLSYENAQ LKREKDWALK EFQSLEMINK HLKEQLSRSI KPEAKEHDEA  240
PKASQVETAA SAPFCCYNQH PFQLFCWSPV IQSSSSAALP QNGLTVPSMI SARASTKVEP  300
SKEQEKPGND DGMKPPFYIV PCPWFLPPPG QTNGVQTVVP YELENIQEGC SLRHVDNIQS  360
LPSRLPSITK EGDSTRGFYD LNKSAPDIPA EGEPSFFFKH EEASQPANGP ALISLPEESR  420
GYVGYSSSKR LVDSVAAADA RKRRKELTRL KNLHSRQCRM QV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1440445RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010527692.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010527692.10.0PREDICTED: uncharacterized protein LOC104804992 isoform X3
TrEMBLV4L5161e-136V4L516_EUTSA; Uncharacterized protein (Fragment)
STRINGXP_010527686.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-115bZIP family protein