PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_010521602.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
||||||||
Family | EIL | ||||||||
Protein Properties | Length: 692aa MW: 78442.4 Da PI: 5.9135 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 501.8 | 3.4e-153 | 99 | 474 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el++rmw+d+ +lkrlke++k e ++a+k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WW XP_010521602.1 99 DELERRMWRDKLRLKRLKEQTKT----PEG-ADAAKRRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWW 188 79******************997....566.8999************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 k+ v+fdrngpaai+kyqa+n+i++ +++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG e+ww++lgl+kdq XP_010521602.1 189 KDRVRFDRNGPAAIAKYQAENNIPGCNEGSNP-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGMEEWWPQLGLPKDQ 282 ******************************88.9************************************************************* PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...XXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...slrkqspkvtlsceqke 282 g+ppykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee ++++++++s s++ +s ++ +++ +++ XP_010521602.1 283 GPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEETLARELYPESCpplSSTGGSGSLLINDCNEY 377 *************************************************************************444467777************* PP XXXXXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXX CS EIN3 283 dvegkkeskikhvqavktta............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsi 349 dve+ +++ + +v+ +k ++ +++++rkr ++s+ + +++v +c++ ++++s+ +l f d++s+ XP_010521602.1 378 DVEVVDKEPVYDVEDHKPERvisppnfpmpkmhmiqqhfpvkeevtggNLEFTRKRG-PNSDLNPRLDRRV-FNCENRHCPHSQINLAFLDRTSR 470 ***777777799999999889***********************************9.8888888888865.*********************** PP XXXX CS EIN3 350 sqne 353 ++++ XP_010521602.1 471 DNHQ 474 **98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 6.1E-129 | 99 | 346 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 7.9E-76 | 220 | 356 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.02E-61 | 225 | 349 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 692 aa Download sequence Send to blast |
MMFLSIFDES GTLFDFSISD GVLLDPGIAN FTIWSTDLKR KTSVWKMMMF SEMGMCGNMD 60 FFSSASLGEV DICPAPPAET EPEEPVVEDD YTDEEMDVDE LERRMWRDKL RLKRLKEQTK 120 TPEGADAAKR RQSQEQARRK KMSRAQDGIL KYMLKMMEVC KAQGFVYGII PEKGKPVTGA 180 SDNLREWWKD RVRFDRNGPA AIAKYQAENN IPGCNEGSNP IGPTPHTLQE LQDTTLGSLL 240 SALMQHCDPP QRRFPLEKGV PPPWWPTGME EWWPQLGLPK DQGPPPYKKP HDLKKAWKVG 300 VLTAVIKHMS PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEETLAR ELYPESCPPL 360 SSTGGSGSLL INDCNEYDVE VVDKEPVYDV EDHKPERVIS PPNFPMPKMH MIQQHFPVKE 420 EVTGGNLEFT RKRGPNSDLN PRLDRRVFNC ENRHCPHSQI NLAFLDRTSR DNHQLVCPYR 480 ESSIAYGAMA KFHVGEVKPQ PSQPRPAVAT VNSAVRPFDL SGVGVPEDGQ KMITELMSIY 540 DRNVQSNHQT ASMVENQNIT TLQPKPQNHQ QQQQQQQFNH STGNTIQGSF FEDLLIPNGN 600 SNSNGNSNSK NMFLQGNNMF KFSNPQFEAA HNNNSSNNNN NNTNSGFQLV FESTPFDLAS 660 FDYRDELQAV GIDGMAKQQL QQQQQQDVSI WF |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 8e-86 | 224 | 356 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 8e-86 | 224 | 356 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_010521602.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_019056579.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform X1 | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | R0I181 | 0.0 | R0I181_9BRAS; Uncharacterized protein | ||||
STRING | XP_010521602.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2135 | 28 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |