PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010520059.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 466aa    MW: 51699.3 Da    PI: 7.274
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010520059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64e-11156186333
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                     + k  rr+++NReAAr+sR+RKka++++Le 
  XP_010520059.1 156 DTKTLRRLAQNREAARKSRLRKKAYVQQLES 186
                     57899************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.2E-8153202No hitNo description
SMARTSM003382.0E-6154218IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.726156200IPR004827Basic-leucine zipper domain
PfamPF001703.4E-8157187IPR004827Basic-leucine zipper domain
CDDcd147081.65E-21158210No hitNo description
SuperFamilySSF579592.17E-7158199No hitNo description
PROSITE patternPS000360161176IPR004827Basic-leucine zipper domain
PfamPF141442.7E-30250324IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MQGHHPHHHQ LSASTSSSHG NFIFCRNKDD GSYELGDMDP TSLFLYLDAQ GHQDPSSTAP  60
DHRHHNLAMR PPTSTLNIFP SQPMHVEPPA SSSAKSESRL VLAEPRCSNR PSEPTMQLTN  120
PANAPPFQPE PSKSIKKEVN LKGHAPSHQE RPKTPDTKTL RRLAQNREAA RKSRLRKKAY  180
VQQLESCRIK LTQLEQEIQR ARAQGVFFGG TLTGGDQQGL HIGPGNISSA EAAVFDMEYG  240
RWLEEQQRLL SELRAAVEEQ LPENELRMFV DNVLGHYDQI VNLKAMVAKS DVFHLVSGAW  300
KSPAERCFMW LGGFRPSEII KVVVNRIEPL TEQQIVGICG LQQSTHEAEE ALSQGLEALN  360
QSLSDTIASD SLSASAVAAE ATATAAAFPP PPPTPSYISQ MSLALNKLSA LENFVLQADH  420
LRHQTVHRLH QLLTTHQAAR SLLAIADYFH RLQALSSLWM ARPRQD
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA9, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010520059.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010520059.10.0PREDICTED: transcription factor TGA2.2 isoform X1
SwissprotE3VNM40.0TGA10_ARATH; Transcription factor TGA10
TrEMBLA0A3P5ZE780.0A0A3P5ZE78_BRACM; Uncharacterized protein
STRINGXP_010520059.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein
Publications ? help Back to Top
  1. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]