PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG044619t1 | ||||||||
Common Name | TCM_044619 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | NAC | ||||||||
Protein Properties | Length: 146aa MW: 17056.4 Da PI: 8.2023 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 53.9 | 5.9e-17 | 9 | 110 | 32 | 128 |
NAM 32 evikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkge 117 + ik++d+y ePw++ + ++++++yfF+k +kk+++++r nr++ g+W + k+++s+ + g kk L + g p+ + Thecc1EG044619t1 9 DLIKDFDLYGEkEPWEIWDlyggCNLQSDEDLYFFTKLKKKSQNSSRINRSVGMGTWMGEDSGKPIYSHlsAVQPLGFKKRLRYE-GGVPH-Q 99 56999*9996449**99633555333467899************************************8767777********97.66666.5 PP NAM 118 ktdWvmheyrl 128 +W+mhey+l Thecc1EG044619t1 100 VGQWIMHEYSL 110 89*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.117 | 1 | 130 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.02E-19 | 6 | 129 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.1E-9 | 21 | 110 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence Send to blast |
MSMLHLDQDL IKDFDLYGEK EPWEIWDLYG GCNLQSDEDL YFFTKLKKKS QNSSRINRSV 60 GMGTWMGEDS GKPIYSHLSA VQPLGFKKRL RYEGGVPHQV GQWIMHEYSL NIDLVPENDQ 120 GYVLCRLRKN DREEKKAEKR RKLIT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 127 | 142 | RKNDREEKKAEKRRKL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017984351.1 | 6e-95 | PREDICTED: NAC domain-containing protein 101 | ||||
TrEMBL | A0A061FRF9 | 1e-104 | A0A061FRF9_THECC; Uncharacterized protein | ||||
STRING | EOY19503 | 1e-104 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 1e-17 | NAC-domain protein 101 |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG044619t1 |
Entrez Gene | 18586992 |
Publications ? help Back to Top | |||
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