PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7DS_3673F1C73.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | EIL | ||||||||
Protein Properties | Length: 614aa MW: 67924.4 Da PI: 5.9428 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 403.2 | 3.2e-123 | 39 | 366 | 1 | 303 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 eel +rmwkd+++lkr+ke++++l ++a+++++k +k ++ a rkkm+raQDgiLkYMlk mevcnaqGfvYgiip+kgkpv+gas Traes_7DS_3673F1C73.4 39 EELARRMWKDKVRLKRIKEKQQRLA-LEQAELEKSKPKKLSDLALRKKMARAQDGILKYMLKLMEVCNAQGFVYGIIPDKGKPVSGAS 125 8*******************99866.55666********************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS EIN3 89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176 d++raWWkekv+fd+ngpaai+ky+ +n +l +++s+ +++++ sl++lqD tlgSLLsalmqhc+p+qr++pl+kg++pPWWP+G Traes_7DS_3673F1C73.4 126 DNIRAWWKEKVKFDKNGPAAIAKYEVENSLLVNAKSS---GTMNQYSLMDLQDGTLGSLLSALMQHCSPQQRKYPLDKGIPPPWWPSG 210 ********************************99999...88********************************************** PP --HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX. CS EIN3 177 kelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah. 263 +e+ww +lgl+k ppy+kphdlkk+wkv+vL vikh+sp++++ir ++r+sk+lqdkm+akes ++l vl++ee ++++ Traes_7DS_3673F1C73.4 211 NEEWWIALGLPKGKT-PPYRKPHDLKKVWKVGVLMGVIKHLSPNFDKIRYHVRKSKCLQDKMTAKESLIWLVVLQREEY-VHSIGNGv 296 ***********9987.***********************************************************9985.66666664 PP XX....XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX...........................X CS EIN3 264 ss....slrkqspkvtlsceqkedvegkkeskikhvqavktta...........................g 303 s +l ++ + +s+ +++dv+ +e+ +++++++ + Traes_7DS_3673F1C73.4 297 SDthlvNLG-DKHESSYSSCDEYDVDCMEEPPKSTISKDDVGVhqpavhireengsssgnkkrhdkrstqT 366 335443444.555555566669****888888899999998885555555555543333333333333321 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.4E-123 | 39 | 287 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 5.0E-66 | 161 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.29E-58 | 167 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 614 aa Download sequence Send to blast |
MMDNLAIVTK ELGDVSDFEV DGIPNLSEND VSDEEIEAEE LARRMWKDKV RLKRIKEKQQ 60 RLALEQAELE KSKPKKLSDL ALRKKMARAQ DGILKYMLKL MEVCNAQGFV YGIIPDKGKP 120 VSGASDNIRA WWKEKVKFDK NGPAAIAKYE VENSLLVNAK SSGTMNQYSL MDLQDGTLGS 180 LLSALMQHCS PQQRKYPLDK GIPPPWWPSG NEEWWIALGL PKGKTPPYRK PHDLKKVWKV 240 GVLMGVIKHL SPNFDKIRYH VRKSKCLQDK MTAKESLIWL VVLQREEYVH SIGNGVSDTH 300 LVNLGDKHES SYSSCDEYDV DCMEEPPKST ISKDDVGVHQ PAVHIREENG SSSGNKKRHD 360 KRSTQTLPST KETKKPPKRR RHTGQCSVDG SEVEGTQRND NMPEVLSNAI PDMNSNQMEV 420 VCVANPLTSF NHAGTNGGSL QHQGDVQGNF VPPGVVVNNY SQAANIAPSS IYMVDQPLAS 480 ESNDYTNSWP GNTFQPDVGL GSIGFSSSSH DYQSSAAKHS VPLPTDNHVP AMGTGALNSS 540 YSHHMAGSGN STSVAGDTQQ IMSDAFYIDP DDKFIGSSFD GLPLDFIGIN SPIPDLDELD 600 ELLDDNDLMQ YLGT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 2e-61 | 167 | 287 | 9 | 129 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK371088 | 0.0 | AK371088.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2124J15. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020146451.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146452.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146453.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146454.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146456.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146457.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-137 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A3B6TPM4 | 0.0 | A0A3B6TPM4_WHEAT; Uncharacterized protein | ||||
STRING | Traes_7DS_3673F1C73.4 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3720 | 37 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-139 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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