PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DL_67C4287B2.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 287aa    MW: 31029.9 Da    PI: 9.004
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DL_67C4287B2.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.45.6e-22140201163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv eL+a N +L++el++lk+ ++++++e+
  Traes_7DL_67C4287B2.2 140 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKD-CKTMETEN 201
                            89**************************************************86.66666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-15137193No hitNo description
PfamPF001707.5E-20140201IPR004827Basic-leucine zipper domain
SMARTSM003386.6E-18140203IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.174142204IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11143195No hitNo description
CDDcd147025.15E-19145191No hitNo description
PROSITE patternPS000360147162IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MAAGVPYMAG ESASAARKGK RVGKTRRAPF GKINSSSGSG DAGSQGSSEK GVTGANQKGS  60
SSSAKRRKSG ATNTEGEPSQ AATVQNVVTE PPLEDKEMSA SKLLVLAPGR AALTSAAPNL  120
NIGTDPLSAS PSSLVQGEDE RELKRERRKQ SNRESARRSR LRKQQECEEL AQKVSELTAA  180
NGTLRSELDQ LKDCKTMETE NKQLMGKILS HDDKMQQSEG PSIVTTLSIQ VESPEPHPVP  240
VVEHLLPQTS EKMCTNGCFG RRLLQEEVAR MPMYWCIQIG DWKFFEG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156162RRSRLRK
2156163RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankTAU079330.0U07933.1 Triticum aestivum Chinese spring DNA-Binding protein (EmBP-1a) mRNA, complete cds.
GenBankTAU104670.0U10467.1 Triticum aestivum Chinese spring bZIP protein (EmBP-1a) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175793.11e-127DNA-binding protein EMBP-1
SwissprotP250321e-128EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A446USQ81e-127A0A446USQ8_TRITD; Uncharacterized protein
TrEMBLA0A446UST51e-127A0A446UST5_TRITD; Uncharacterized protein
STRINGTraes_7DL_67C4287B2.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-13basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]