PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Traes_7BS_733347AC0.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | EIL | ||||||||
Protein Properties | Length: 613aa MW: 67719.1 Da PI: 5.6421 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 404.7 | 1.1e-123 | 39 | 356 | 1 | 320 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 eel +rmwkd+++lkr+ke++++l ++a+++++k +k ++ a rkkm+raQDgiLkYMlk mevcnaqGfvYgiip+kgkpv+gas Traes_7BS_733347AC0.1 39 EELARRMWKDKVRLKRIKEKQQRLA-LEQAELEKSKPKKLSDLALRKKMARAQDGILKYMLKLMEVCNAQGFVYGIIPDKGKPVSGAS 125 8*******************99866.55666********************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS EIN3 89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176 d++raWWkekv+fd+ngpaai+ky+ +n +l +++s+ +++++ sl++lqD tlgSLLsalmqhc+p+qr++pl+kg++pPWWP+G Traes_7BS_733347AC0.1 126 DNIRAWWKEKVKFDKNGPAAIAKYEVENSLLVNAKSS---GTMNQYSLMDLQDGTLGSLLSALMQHCSPQQRKYPLDKGIPPPWWPSG 210 ********************************99999...88********************************************** PP --HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX. CS EIN3 177 kelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah. 263 +e+ww +lgl+k ppy+kphdlkk+wkv+vL vikh+sp++++ir ++r+sk+lqdkm+akes ++l vl++ee ++++ Traes_7BS_733347AC0.1 211 NEEWWIALGLPKGKT-PPYRKPHDLKKVWKVGVLMGVIKHLSPNFDKIRYHVRKSKCLQDKMTAKESLIWLVVLQREEY-VHSIGNGv 296 ***********9987.***********************************************************9985.66666665 PP XX....XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 264 ss....slrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakv 320 s+ l ++++ +s+ +++dv+ +e+ ++++++++ + p+v+ r+++ s+s Traes_7BS_733347AC0.1 297 SNthlvDLG-DKNESSYSSCDEYDVDCMEEPPQSTISKDDVGVHQPAVHIREENGSSSGNK 356 435443444.555566666669****99999999999999988555555554322222211 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.4E-123 | 39 | 287 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 5.0E-66 | 161 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.29E-58 | 167 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 613 aa Download sequence Send to blast |
MMDNLAIVAK ELGDVSDFEV DGIPNLSEND VSDEEIEAEE LARRMWKDKV RLKRIKEKQQ 60 RLALEQAELE KSKPKKLSDL ALRKKMARAQ DGILKYMLKL MEVCNAQGFV YGIIPDKGKP 120 VSGASDNIRA WWKEKVKFDK NGPAAIAKYE VENSLLVNAK SSGTMNQYSL MDLQDGTLGS 180 LLSALMQHCS PQQRKYPLDK GIPPPWWPSG NEEWWIALGL PKGKTPPYRK PHDLKKVWKV 240 GVLMGVIKHL SPNFDKIRYH VRKSKCLQDK MTAKESLIWL VVLQREEYVH SIGNGVSNTH 300 LVDLGDKNES SYSSCDEYDV DCMEEPPQST ISKDDVGVHQ PAVHIREENG SSSGNKKRHD 360 KRSTQRLPST KETKNPPKRR RHTGQCSVDG SEVEGTQRND NMPEVLSNAI PDMKSNQMEV 420 VCVANPLTSF NHAGTNGGSL QHQGDVQGNF VPPGVVVNNY SQAANIASSS IYMVDQPLAS 480 ESNDYTNSWP GNTFQPDVGL GSIGFSSSSH DYQSSAAKDS VPLSMDNHVP AMGTGALNSS 540 YSHMAGSGNS TSVAGGTQQI MSDAFYIDPD DKFIGSSFDG LPLDFIGINS PIPDLDELDE 600 LLDDNDLMQY LGT |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 1e-61 | 167 | 287 | 9 | 129 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AK371088 | 0.0 | AK371088.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2124J15. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020146451.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146452.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146453.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146454.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146456.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_020146457.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-136 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A446YC62 | 0.0 | A0A446YC62_TRITD; Uncharacterized protein | ||||
STRING | Traes_7BS_733347AC0.1 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3720 | 37 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-139 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
---|---|---|---|
|