PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7BL_BB971D610.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 306aa    MW: 32844.3 Da    PI: 7.9208
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7BL_BB971D610.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.72.3e-12852347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +W++eE++ ++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
  Traes_7BL_BB971D610.1  8 SWSEEEHKNFLLGLNKLGKGDWRGISRNYVVSRTPTQVASHAQKY 52
                           7*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.19157IPR017930Myb domain
SMARTSM007173.4E-9555IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.3E-9751IPR009057Homeodomain-like
TIGRFAMsTIGR015575.5E-17756IPR006447Myb domain, plants
SuperFamilySSF466891.17E-14758IPR009057Homeodomain-like
PfamPF002492.5E-10852IPR001005SANT/Myb domain
CDDcd001671.57E-8853No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MLDGGGESWS EEEHKNFLLG LNKLGKGDWR GISRNYVVSR TPTQVASHAQ KYFIRQTNVN  60
RRKRRSSLFD MVIEDPGDQP LSRSSSQEMP LSRSSSQDVE EFVDDLRPVT APVTPPAPMP  120
VIASVSVPPP VPVMAPPAPV PMLTYGSAPS PVLAMAHQPQ GNESAGSSSI AGEAGMVMPQ  180
VMPPYGYPPP MMIPTPHYVQ AVFPFPYYGY APMFYGPPVS MQASSPGTVQ ASHEPVRPVA  240
VHSAPPVNVE DLYNMSKLNL KGDSSTNGVA PKLALPPNPN GRPERQSAFH GKGPENGSSN  300
GLIPTK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519520.0JF951952.1 Triticum carthlicum clone TaMYB69 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020170412.10.0transcription factor MYB1R1-like
TrEMBLA0A446YHY00.0A0A446YHY0_TRITD; Uncharacterized protein
STRINGTraes_7BL_BB971D610.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129002629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.19e-28MYB_related family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]