PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AS_FED21D983.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TALE
Protein Properties Length: 484aa    MW: 53475.7 Da    PI: 7.008
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AS_FED21D983.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.87.7e-083013381954
                            HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
               Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                            Fe   ++yp+  ++  LA++ gL+ +qV++WF N R +
  Traes_7AS_FED21D983.1 301 FEHflHPYPNDVDKHILARQSGLSRSQVSNWFINARVR 338
                            5544589*****************************88 PP
2BELL91.67.8e-30155224372
                   BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                            ++l+++ka+Lls++eeVd+ Y +y+e++++   sFeavag+g+a++Yt++A++a+SrhFrcL+da+++qi
  Traes_7AS_FED21D983.1 155 MALERRKARLLSMIEEVDRCYWRYREKMRATEMSFEAVAGVGAAQVYTKMAMRAMSRHFRCLRDALVGQI 224
                            7899****************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.5E-4588222IPR006563POX domain
PfamPF075262.4E-3794220IPR006563POX domain
CDDcd000862.40E-10282343No hitNo description
SMARTSM003891.3E-7282346IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.0E-26285348IPR009057Homeodomain-like
SuperFamilySSF466892.22E-16285349IPR009057Homeodomain-like
PfamPF059202.5E-16299338IPR008422Homeobox KN domain
PROSITE profilePS5007111.062301342IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MMASHEPHHH LLGFSSSSPV TPNPAAMAMA FDHHGVFAPL HEDMPPRFGG ADDRSWLPQS  60
STLSLYDTVG QHELQPFTVA PPSMMPMQQP PFRLNSSRYL GPARELLSEF CNLEGDAMNG  120
GAMMRAPKQD GEVEASSPAC GPWGANPSVS SMDYMALERR KARLLSMIEE VDRCYWRYRE  180
KMRATEMSFE AVAGVGAAQV YTKMAMRAMS RHFRCLRDAL VGQIRTLKKS MGESRDADGM  240
LVAPGASKGD TPRLRVVDQC LRRQRAFQQY GGGAAIESCP WRPPQRGLPE RAVAVLRSWL  300
FEHFLHPYPN DVDKHILARQ SGLSRSQVSN WFINARVRLW KPMIEEMYAE ETIQHDDGGT  360
SSGRGEPAPT DHHNNNLAAC TTVTITGDQN CHRLSGRNNP GDCFIPSSLV VDGGKFLHGY  420
PSLRSDSGSG VVSLTLGLQQ QQAFASPAMI MQQQSSLMIG AEGEDMVLPY RNLMGSELLH  480
DFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5bng_A6e-15288346159Homeobox protein Meis2
5bng_B6e-15288346159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020149277.10.0homeobox protein BEL1 homolog
RefseqXP_020166134.10.0homeobox protein BEL1 homolog
TrEMBLA0A3B6R7D40.0A0A3B6R7D4_WHEAT; Uncharacterized protein
TrEMBLA0A446WX120.0A0A446WX12_TRITD; Uncharacterized protein
STRINGTraes_7AS_FED21D983.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63983547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.13e-94TALE family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]