PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AS_ED6E0EE34.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 55aa    MW: 6375.49 Da    PI: 10.1418
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AS_ED6E0EE34.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.33.1e-071252448
                           HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                           W+ +++  g+ R++k+c++rw +yl
  Traes_7AS_ED6E0EE34.1  1 WRVVPKLAGLLRCGKSCRLRWTNYL 25
                           99*******99************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.87E-12153IPR009057Homeodomain-like
PROSITE profilePS5129413.824129IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.8E-8126IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.9E-72752IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 55 aa     Download sequence    Send to blast
WRVVPKLAGL LRCGKSCRLR WTNYLRPDLK RGLLSDEEQQ LVIDLHAQLG NRCVS
Functional Description ? help Back to Top
Source Description
UniProtR2R3 MYB-type transcription factor controlling the production of volatile benzoides in flowers by regulating the shikimate pathway, namely by activation of the 5-enol-pyruvylshikimate-3-phosphate synthase gene. This scent, mostly produced in the evening and night by the petals, attracts the pollinators. Anthocyanins production is not controlled by ODO1 as color and scent are produced at different stages of development. {ECO:0000269|PubMed:15805488}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Increases before the onset of volatile emission at the end of the light period, peaks at night and decreases when volatile emission declines early morning.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0089817e-83BT008981.2 Triticum aestivum clone wdk2c.pk006.d4:fis, full insert mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020147496.12e-29protein ODORANT1-like
SwissprotQ50EX62e-27ODO1_PETHY; Protein ODORANT1
TrEMBLA0A287W7K13e-30A0A287W7K1_HORVV; Uncharacterized protein
TrEMBLA0A446Y8S86e-30A0A446Y8S8_TRITD; Uncharacterized protein
STRINGTraes_7AS_ED6E0EE34.12e-32(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1419722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12350.11e-30myb domain protein 42
Publications ? help Back to Top
  1. Verdonk JC,Haring MA,van Tunen AJ,Schuurink RC
    ODORANT1 regulates fragrance biosynthesis in petunia flowers.
    Plant Cell, 2005. 17(5): p. 1612-24
    [PMID:15805488]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]