PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AS_34D476D5D1.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family EIL
Protein Properties Length: 614aa    MW: 67855.2 Da    PI: 5.7347
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AS_34D476D5D1.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3402.84.2e-123393561320
                             XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                    EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvega 87 
                             eel +rmwkd+++lkr+ke++++l   ++a+++++k +k ++ a rkkm+raQDgiLkYMlk mevcnaqGfvYgiip+kgkpv+ga
  Traes_7AS_34D476D5D1.1  39 EELARRMWKDKVRLKRIKEKQQRLA-LEQAELEKSKPKKLSDLALRKKMARAQDGILKYMLKLMEVCNAQGFVYGIIPDKGKPVSGA 124
                             8*******************99866.55666******************************************************** PP

                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH-- CS
                    EIN3  88 sdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWP 174
                             sd++raWWkekv+fd+ngpaai+ky+ +n +l +++s+   +++++ sl++lqD tlgSLLsalmqhc+p+qr++pl+kg++pPWWP
  Traes_7AS_34D476D5D1.1 125 SDNIRAWWKEKVKFDKNGPAAIAKYEVENSLLVNAKSS---GTMNQYSLMDLQDGTLGSLLSALMQHCSPQQRKYPLDKGIPPPWWP 208
                             *********************************99999...88******************************************** PP

                             -S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS
                    EIN3 175 tGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvs 261
                             +G+e+ww +lgl+k    ppy+kphdlkk+wkv+vL  vikh++p++++ir ++r+sk+lqdkm+akes ++l vl++ee  ++++ 
  Traes_7AS_34D476D5D1.1 209 SGSEEWWIALGLPKGKT-PPYRKPHDLKKVWKVGVLMGVIKHLAPNFDKIRYHVRKSKCLQDKMTAKESLIWLVVLQREEY-VHSIG 293
                             *************9987.***********************************************************9985.66666 PP

                             XX.XX.XXXX..XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                    EIN3 262 ah.ss.slrk..qspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakv 320
                                s  +l +  ++++  +s+ +++dv+  +e+ ++++++++   + p+v+ r+++ s+s   
  Traes_7AS_34D476D5D1.1 294 NGvSDtHLVDlgDKNECSYSSCDEYDVDCMEEPPQSTISKDDVGVHQPAVHIREENGSSSGNK 356
                             66433544445588899999999*****99999999999999988555555555322222211 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.7E-12339287No hitNo description
Gene3DG3DSA:1.10.3180.101.7E-65161289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.62E-58167289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    Send to blast
MMDNLAIVAK ELGDVSDFEV DGIPNLSEND VSDEEIEAEE LARRMWKDKV RLKRIKEKQQ  60
RLALEQAELE KSKPKKLSDL ALRKKMARAQ DGILKYMLKL MEVCNAQGFV YGIIPDKGKP  120
VSGASDNIRA WWKEKVKFDK NGPAAIAKYE VENSLLVNAK SSGTMNQYSL MDLQDGTLGS  180
LLSALMQHCS PQQRKYPLDK GIPPPWWPSG SEEWWIALGL PKGKTPPYRK PHDLKKVWKV  240
GVLMGVIKHL APNFDKIRYH VRKSKCLQDK MTAKESLIWL VVLQREEYVH SIGNGVSDTH  300
LVDLGDKNEC SYSSCDEYDV DCMEEPPQST ISKDDVGVHQ PAVHIREENG SSSGNKKHHD  360
KRSTQRLPST KETKRPPKRR RHTGQCSVDG SEVEGTQRND NNAEVLSNSI PDMKSNQMEV  420
VCVANPLTSF NPAGTNGGSL QHQGDVQGNF VPPGVVVNNY SQAANIASSS IYMVDQPLAS  480
ESNDYTNSWP GNTFQPDVGL GSIGFSSSSH DYQSSAAKHS VPLSVDNHVP AMGTGALNSS  540
YSHHMAGSGN STSVAGDTQP IMSDAFYIDP DDKFMGSSFD GLPFDFIGIN SPIPDLDELD  600
ELLDDNDLMQ YLGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A8e-611672879129ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1374379RPPKRR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3710880.0AK371088.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2124J15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146451.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146452.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146453.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146454.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146456.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146457.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-136EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A3B6RHS70.0A0A3B6RHS7_WHEAT; Uncharacterized protein
TrEMBLA0A446XCG20.0A0A446XCG2_TRITD; Uncharacterized protein
STRINGTraes_7AS_34D476D5D1.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-121ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  3. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  4. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  5. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]