PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6DL_10077D5F6.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family EIL
Protein Properties Length: 458aa    MW: 50665.1 Da    PI: 5.1943
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6DL_10077D5F6.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3369.27e-113643252265
                            XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasd 89 
                            +lkkrmwkdqm+l++l++r   + ++     + ++++ ++ + rrk+m raQDg+L++M+k+m+ cna+GfvYg i+e g+p +g+sd
  Traes_6DL_10077D5F6.1  64 DLKKRMWKDQMRLMKLEGRAGARSGAPAGRQEDQEEDGPEARCRRKAMLRAQDGVLRHMMKMMQSCNARGFVYGVIDEAGEPTSGSSD 151
                            9*********************999999999999999*************************************************** PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S- CS
                   EIN3  90 sLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGk 177
                            sLr+WWk+kv fdr+gp+a+s + +  ++ ++ s       s+ h+l+ +qD tlgS+Lsal qhc+ppqr+fple+g++pPWWPtGk
  Traes_6DL_10077D5F6.1 152 SLRGWWKDKVVFDRTGPMALSLTGS-SAADGSTSP--LGLASYLHRLQAIQDNTLGSMLSALLQHCEPPQRNFPLERGLAPPWWPTGK 236
                            *********************8843.333333344..4679*********************************************** PP

                            -HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXX CS
                   EIN3 178 elwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahs 264
                            elwwg++g ++++qg+ppy+kphdlkkawkvs+L+avikhmsp+++++r+l++qsk+lq+kmsakes+++++vl+qee++  +++++ 
  Traes_6DL_10077D5F6.1 237 ELWWGTQGeTQAHQGAPPYRKPHDLKKAWKVSLLSAVIKHMSPRFDQMRRLVWQSKRLQHKMSAKESDTWSKVLRQEEALSGRLKSSL 324
                            ******************************************************************************9887777664 PP

                            X CS
                   EIN3 265 s 265
                            +
  Traes_6DL_10077D5F6.1 325 R 325
                            3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.3E-11464314No hitNo description
Gene3DG3DSA:1.10.3180.102.1E-64189322IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.62E-57192316IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MCAVSMDQGT HCWSPFPMER LDAHGGGNAA FGLEALEVDV EQQEEIIDFE TEPPGSSESV  60
EISDLKKRMW KDQMRLMKLE GRAGARSGAP AGRQEDQEED GPEARCRRKA MLRAQDGVLR  120
HMMKMMQSCN ARGFVYGVID EAGEPTSGSS DSLRGWWKDK VVFDRTGPMA LSLTGSSAAD  180
GSTSPLGLAS YLHRLQAIQD NTLGSMLSAL LQHCEPPQRN FPLERGLAPP WWPTGKELWW  240
GTQGETQAHQ GAPPYRKPHD LKKAWKVSLL SAVIKHMSPR FDQMRRLVWQ SKRLQHKMSA  300
KESDTWSKVL RQEEALSGRL KSSLRITPLE DDDDYDGEEL EDGPEDVARG PHDKRKCKGV  360
PSGSSGGKCR RRPRGGSRDL AAMVPALEAG VLAEESQGPI NELMELYYSC LQGGDAEEKQ  420
DVAMQGVPGG VDDVAQQFLI DVIGSCPEVD HVLRLMEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-481933204130Protein ETHYLENE INSENSITIVE 3
4zds_B2e-481933204130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003572647.20.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ52e-92EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A3B6QMH20.0A0A3B6QMH2_WHEAT; Uncharacterized protein
STRINGTraes_6DL_10077D5F6.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.12e-94EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]