PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_5BL_DE53199D3.3

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 365aa MW: 39091.1 Da PI: 8.9812

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_5BL_DE53199D3.3	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.5	1.5e-13	286	336	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+ N++L + +e+ ++ Traes_5BL_DE53199D3.3 286 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKDLNEELVRKQKEILEM 336 79************************************9887666655444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.6E-10	282	340	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.576	284	333	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.7E-10	286	333	No hit	No description
CDD	cd14707	7.77E-25	286	338	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.3E-13	286	333	No hit	No description
Pfam	PF00170	1.3E-11	286	336	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	289	304	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence Send to blast
MLKEDRWGGT EGIMDFRSSN GGSSSERGPA EAAPLTRQGS IYSLTFEEFQ STLGGGAGVG 60 GSDLGKDFSS MNMDELLRSI WTAEESQAMA ASASGAGAGP PPTSLQGQGS LTLPRTLSAK 120 TVDEVWRNLV RDDPLPVGAE GAXQPHRQAT LGEMTLEEFL VKAGVVREIP TAPAVPAPPM 180 QPRPVPVVPK GPSFYGNFPS ANDAGAAALG FPPVAMGDLA LANGLMPRAV GMGGAPLVVQ 240 TAVNPVDSGG KGSEDLSSPS EPMPYSFEGI VRGRRTGGGV EKVVERRQRR MIKNRESAAR 300 SRARKQAYTM ELEAEVQKLK DLNEELVRKQ KEILEMQKRE QAPEMKDQFG RKKRQCLRRT 360 LTGPW

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence Send to blast

MLKEDRWGGT EGIMDFRSSN GGSSSERGPA EAAPLTRQGS IYSLTFEEFQ STLGGGAGVG  60
GSDLGKDFSS MNMDELLRSI WTAEESQAMA ASASGAGAGP PPTSLQGQGS LTLPRTLSAK  120
TVDEVWRNLV RDDPLPVGAE GAXQPHRQAT LGEMTLEEFL VKAGVVREIP TAPAVPAPPM  180
QPRPVPVVPK GPSFYGNFPS ANDAGAAALG FPPVAMGDLA LANGLMPRAV GMGGAPLVVQ  240
TAVNPVDSGG KGSEDLSSPS EPMPYSFEGI VRGRRTGGGV EKVVERRQRR MIKNRESAAR  300
SRARKQAYTM ELEAEVQKLK DLNEELVRKQ KEILEMQKRE QAPEMKDQFG RKKRQCLRRT  360
LTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269\|PubMed:10611387}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By abscisic acid (ABA). {ECO:0000269\|PubMed:10611387}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AB362819	0.0	AB362819.1 Triticum aestivum Wabi5-2 mRNA for basic region leucine zipper protein, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020177660.1	0.0	bZIP transcription factor TRAB1-like isoform X1
Swissprot	Q6ZDF3	1e-107	TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBL	A0A3B6LLH6	0.0	A0A3B6LLH6_WHEAT; Uncharacterized protein
TrEMBL	A0A446UBT0	0.0	A0A446UBT0_TRITD; Uncharacterized protein
STRING	Traes_5BL_DE53199D3.3	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49720.1	1e-53	abscisic acid responsive element-binding factor 1

Publications ? help Back to Top
Kagaya Y,Hobo T,Murata M,Ban A,Hattori T Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1. Plant Cell, 2002. 14(12): p. 3177-89 [PMID:12468735] Kobayashi Y, et al. Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors. Plant J., 2005. 44(6): p. 939-49 [PMID:16359387] Kobayashi F,Maeta E,Terashima A,Takumi S Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings. Physiol Plant, 2008. 134(1): p. 74-86 [PMID:18433415] Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148]