PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_CC18CAD72.1
Common NameNAC69-1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 354aa    MW: 39585.3 Da    PI: 6.7371
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_CC18CAD72.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1691.5e-52121391128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeel+v+yL++++++ + ++  +i+ev+iyk++PwdLp k+  +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+
  Traes_5BL_CC18CAD72.1  12 LPPGFRFHPTDEELIVHYLRRQAASMPSPV-PIIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGT 98 
                            79*************************999.88***************8777899********************************* PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk++ls+  +e +g+kk Lvfy+g+ pkg+ktdW+mheyrl
  Traes_5BL_CC18CAD72.1  99 DKAILSTpANESIGVKKALVFYRGKPPKGVKTDWIMHEYRL 139
                            *****9988899***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-655167IPR003441NAC domain
PROSITE profilePS5100561.25912167IPR003441NAC domain
PfamPF023655.5E-2713139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009825Biological Processmultidimensional cell growth
GO:0009835Biological Processfruit ripening
GO:0009908Biological Processflower development
GO:0010150Biological Processleaf senescence
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MPMGSSAAMP ALPPGFRFHP TDEELIVHYL RRQAASMPSP VPIIAEVNIY KCNPWDLPGK  60
ALFGENEWYF FSPRDRKYPN GARPNRAAGS GYWKATGTDK AILSTPANES IGVKKALVFY  120
RGKPPKGVKT DWIMHEYRLT AADNRTTKRR GSSMRLDDWV LCRIHKKCGN LPNFSSSDQE  180
QEHEQESSTV EDSQNNHTVS SPKSEAFDGD GDDHLQLQQF RPMAIAKSCS LTDLLNTVDY  240
AALSHLLLDG AGASSSDAGA DYQLPPENPL IYSQPPWQQT LHYNNNNGYV NNETIDVPQL  300
PEARVDDYGM NGDKYNGMKR KRSSGSLYCS QLQLPADQYS GMLIHPFLSQ QLHM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-731216715168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00221DAPTransfer from AT1G69490Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6256820.0AY625682.1 Triticum aestivum NAC domain transcription factor (NAC69-1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166974.10.0NAC transcription factor 29-like
SwissprotK4BWV23e-86NAP1_SOLLC; NAC domain-containing protein 1
TrEMBLA0A446U3G70.0A0A446U3G7_TRITD; Uncharacterized protein
TrEMBLQ5DM360.0Q5DM36_WHEAT; NAC domain transcription factor
STRINGTraes_5BL_CC18CAD72.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38033775
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-82NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Xue GP
    A CELD-fusion method for rapid determination of the DNA-binding sequence specificity of novel plant DNA-binding proteins.
    Plant J., 2005. 41(4): p. 638-49
    [PMID:15686526]
  2. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  3. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  4. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]