PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_B65EF5518.3
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family EIL
Protein Properties Length: 612aa    MW: 68200.7 Da    PI: 6.0058
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_B65EF5518.3genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3414.51.2e-126354191352
                            XXXXXXXXXXXXXXXXXXXXXXX...XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   1 eelkkrmwkdqmllkrlkerkkqll.edkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvega 87 
                            eel +rmwkd+++l+r+ker+++l  +++e +++++k +++++qa rkkm+ra DgiLkYMlk mevcna+GfvYgiipekgkpv+ga
  Traes_5AL_B65EF5518.3  35 EELARRMWKDRVRLRRIKERQQKLAlQQAELELEKSKPKQISDQAMRKKMARAHDGILKYMLKLMEVCNARGFVYGIIPEKGKPVSGA 122
                            8*******************9996414455559999999************************************************* PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH--- CS
                   EIN3  88 sdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPt 175
                            sd++raWWkekv+fd+ngpaai+ky+a++l+ ++++s+     ++ hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg++ PWWP 
  Traes_5AL_B65EF5518.3 123 SDNIRAWWKEKVKFDKNGPAAIAKYEAEHLVDADAQSS---VVKTEHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLEKGTPTPWWPA 207
                            *******************************8877777...78********************************************* PP

                            S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX CS
                   EIN3 176 GkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah 263
                            G+e+ww++lgl++ q   pykkphdlkk+wkv+vLt+vikhmsp++++ir+++r+sk lqdkm+akes ++l vl++ee+++  +   
  Traes_5AL_B65EF5518.3 208 GNEEWWAALGLPRGQI-APYKKPHDLKKVWKVGVLTCVIKHMSPNFDKIRNHVRKSKILQDKMTAKESLIWLGVLQREERLVLGIDNG 294
                            ***************9.8***************************************************************9988887 PP

                            .XX......XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..................................XXXXXXXX CS
                   EIN3 264 .ss......slrkqspkvtlsceqkedvegkkeskikhvqavktta..................................gfpvvrkr 310
                             s+         ++ ++   s+++++dv+g +e   + +++++++                                   + +   kr
  Traes_5AL_B65EF5518.3 295 vSEithrsaPEDRNGTRNAQSSSNEYDVDGFEEAPLSISSKDDEQGlspaaqsseehvsgrdrerantkhlyqavvlkegTKKQPPKR 382
                            5335555443333666667778889****88888877777777655888899988899999999999999999986666433344444 PP

                            XXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXX CS
                   EIN3 311 kkkpsesakvsskevsrtcqssqfrgsetelifadknsisqn 352
                            k+ +++s +v ++ev    q+     +++ + ++d+n+++q 
  Traes_5AL_B65EF5518.3 383 KRARHSSVAV-EQEV----QRTDDAPENPGNLIPDMNRLDQV 419
                            4333333333.3334....44444445677788888888775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048735.5E-12235285No hitNo description
Gene3DG3DSA:1.10.3180.104.7E-66159289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-56165287IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    Send to blast
MDQLALLATE FGDSSDFEVD GINENDVSDE EIEPEELARR MWKDRVRLRR IKERQQKLAL  60
QQAELELEKS KPKQISDQAM RKKMARAHDG ILKYMLKLME VCNARGFVYG IIPEKGKPVS  120
GASDNIRAWW KEKVKFDKNG PAAIAKYEAE HLVDADAQSS VVKTEHSLMD LQDATLGSLL  180
SSLMQHCNPP QRKYPLEKGT PTPWWPAGNE EWWAALGLPR GQIAPYKKPH DLKKVWKVGV  240
LTCVIKHMSP NFDKIRNHVR KSKILQDKMT AKESLIWLGV LQREERLVLG IDNGVSEITH  300
RSAPEDRNGT RNAQSSSNEY DVDGFEEAPL SISSKDDEQG LSPAAQSSEE HVSGRDRERA  360
NTKHLYQAVV LKEGTKKQPP KRKRARHSSV AVEQEVQRTD DAPENPGNLI PDMNRLDQVE  420
IPGMANHQIT SFNQMAVTSE ALQHSGNAQG HVYLPGSGVN GFDNAQPVDA TPVSIYQPVL  480
YGSSDNARSK SGNPFPLHAN SGFNSFPSNY QTLPPKQSVP LPMMDHHVVP MGIRAPADNS  540
PYGDHVIGGG ISTSVPGDMQ HLVDFPFYGE QDKFVGSSFE GLPLDYISMS SPIPDIDDLL  600
LHDDDLMEYL GT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-6116828812132ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2495820.0AK249582.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf40h12, mRNA sequence.
GenBankAK3641870.0AK364187.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2022H23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187998.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-141EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A446T6K20.0A0A446T6K2_TRITD; Uncharacterized protein
STRINGTraes_5AL_B65EF5518.30.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-138ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  3. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  4. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  5. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]