PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4BS_9E4FBF387.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | B3 | ||||||||
Protein Properties | Length: 429aa MW: 48129.3 Da PI: 7.1492 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41.1 | 3.3e-13 | 36 | 114 | 12 | 97 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 k + +++p++ ++ ++ s t++l ++gr ++v + + g+ v+++GW Fv a++++e+D+++F ++g+s+f +++f Traes_4BS_9E4FBF387.1 36 K-NSIRIPRELSTHLR--SRISDTIKLSAPNGRAYDVVV--TWEFGELVIRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 114 3.45999*99874444..45888****************..5556679***************************9999..66666 PP | |||||||
2 | B3 | 40 | 7.1e-13 | 205 | 290 | 9 | 98 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 + k + + +p + + +h +++++s ++le ++g+ ++v+ +k+s+ +vl++ W Fv an+++ +D ++F+ + +++l+v Traes_4BS_9E4FBF387.1 205 VNVKDCSINIPLRLV-RHLKEEAGSAIIKLEAPDGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHS--KGKTRLKVL 287 46678999*******.5555678999****************..7777777*************************3..356666776 PP EE- CS B3 96 vfr 98 +++ Traes_4BS_9E4FBF387.1 288 ALD 290 665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.96E-17 | 22 | 119 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.758 | 24 | 117 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 0.0027 | 27 | 117 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.2E-16 | 27 | 119 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.52E-13 | 35 | 115 | No hit | No description |
Pfam | PF02362 | 3.3E-11 | 36 | 115 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 4.4E-17 | 187 | 300 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.55E-16 | 191 | 298 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.92E-15 | 194 | 290 | No hit | No description |
PROSITE profile | PS50863 | 9.686 | 197 | 292 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 5.2E-4 | 199 | 292 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.0E-10 | 205 | 288 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence Send to blast |
MNEDCENCAF WRDHYYWEHM GDEKKQFSAV AKGDFKNSIR IPRELSTHLR SRISDTIKLS 60 APNGRAYDVV VTWEFGELVI RSGWDAFVTA HHIEENDTFL FIYHGNSNFE IHIFNSHGCE 120 KMASCFQSPS EIFGIFPPSE PCDHHVLNGQ AAPNPRHVQT QVEFDYTMST GCHLTKSQDE 180 KVVEIARKIR SEIPLYVAIM KKLNVNVKDC SINIPLRLVR HLKEEAGSAI IKLEAPDGNI 240 YNVRASKHSE DQVVLQSDWD AFVAANHIQL NDLLIFHSKG KTRLKVLALD PSGCEKNSSC 300 LDTKNFSKTG EGSVWITDAR PCTVEIIDLT SSDDDRTERE DAGRSSGRRK QVPGSHAKAR 360 KMASASSPST KSGPDTHKLK HPISNNDNLQ GPYRPPYILA RGITLTGCVE KKVQEKVQAI 420 GSELPIYVA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A3B6INU1 | 0.0 | A0A3B6INU1_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446RUA1 | 0.0 | A0A446RUA1_TRITD; Uncharacterized protein | ||||
STRING | Traes_4BS_9E4FBF387.1 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP16378 | 7 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 7e-23 | B3 family protein |
Publications ? help Back to Top | |||
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