PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4BL_8D44C3C97.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 48aa MW: 5569.37 Da PI: 5.5032 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 26.2 | 2.3e-08 | 22 | 46 | 3 | 27 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk 27 pGfrFhPt+eel+ +yL + + gkk Traes_4BL_8D44C3C97.1 22 PGFRFHPTEEELLGFYLSRVALGKK 46 9******************998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.07E-8 | 10 | 47 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 11.908 | 20 | 48 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-5 | 22 | 42 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 48 aa Download sequence Send to blast |
QVDHLEQQRA MAMGMEVDQD LPGFRFHPTE EELLGFYLSR VALGKKLH |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC140005 | 2e-33 | AC140005.2 Oryza sativa Japonica Group chromosome 3 clone OJA1004C08, complete sequence. | |||
GenBank | AC212416 | 2e-33 | AC212416.1 Oryza glaberrima clone OG_BBa0011M11, complete sequence. | |||
GenBank | AK107090 | 2e-33 | AK107090.1 Oryza sativa Japonica Group cDNA clone:002-121-G12, full insert sequence. | |||
GenBank | AK367376 | 2e-33 | AK367376.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2055P15. | |||
GenBank | AK367963 | 2e-33 | AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10. | |||
GenBank | AP014959 | 2e-33 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. | |||
GenBank | CP012611 | 2e-33 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020190294.1 | 3e-16 | NAC domain-containing protein 72-like | ||||
Swissprot | Q10S65 | 1e-14 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A453J386 | 4e-19 | A0A453J386_AEGTS; Uncharacterized protein | ||||
STRING | Traes_4BL_8D44C3C97.1 | 1e-27 | (Triticum aestivum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 6e-10 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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